Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00037 ATGAGTGGTGAGAAAAGAGAAGAATATTCGACATCTGAGAAAGAGGAGAAGGAAGAAGAAGATATTGAAGAGAAAGATCATGAGATGCTCAAGAGCAGAATCTCTAACCATCCTCTTTATGACCTTCTCGTTCAGCAACACCTCAACTGTTTGAAGGTGGGTGAGGTTTCCAACTTTGAAAAAGTGAAGAAGAAGAAAGAGAGGAATAAGAAAGCATCAATGAAGCAAAACTTGGGCATGCTTAGTCATTCAGAGCTCGATCACTTCATGGAAGCATATTGTGTGGCGCTAGGGAAGCTGAAAGAAGCAATGGAGGAGCCTCAAACAGAGTCACTGGCTTTCATCAACAACATGCATTCTCAACTCAGAGACCTTGCTGGATTAACCCTCTCTCCTTCTTCCTCTTCCTCTAACCTCCAAACACATCCTTGA 432 0.4259 MSGEKREEYSTSEKEEKEEEDIEEKDHEMLKSRISNHPLYDLLVQQHLNCLKVGEVSNFEKVKKKKERNKKASMKQNLGMLSHSELDHFMEAYCVALGKLKEAMEEPQTESLAFINNMHSQLRDLAGLTLSPSSSSSNLQTHP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00037 143 Pfam KNOX1 domain 30 54 IPR005540 GO:0003677|GO:0005634
Pral4375g00037 143 SMART KNOX1_2 28 68 IPR005540 GO:0003677|GO:0005634
Pral4375g00037 143 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 10 128 - -
Pral4375g00037 143 SMART KNOX2_2 76 127 IPR005541 GO:0003677|GO:0005634
Pral4375g00037 143 MobiDBLite consensus disorder prediction 1 30 - -
Pral4375g00037 143 Pfam KNOX2 domain 84 125 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00037 Pral-Chr4375 255282 256825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00037 26 122 Homeobox Transcription Factor Family AT4G08150 34.653 1.16e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00037 - - gmx:100805160 141.739