Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00036 ATGGCCGTCGTTCGTCAACGCCGCCAACTCAACCTTTGCCTAGTGCTGCCGGAGCCCTCCGATCGTCGCCGTCTCTTCCCCTTGCCCACCGCTTCCTCTTCCACCGTCTTCTCCTCTGCTGCAGATATCACTCCTAACGACATCGAAAAGCTTGAAGTTCTTGGCCATGGAAATGGTGGTACGGTCTACAAGGTTCGCCACAAGCGAACTTCTGCTATCTACGCTCTGAAGGACGTCCCCAGCGGCTCCGACCCGATTACCTGCCGCCAGGTCCGGCGAGAGATGGACATCCTCCGACGGACGGACTCGCCTTATGTAGTACAATTCCACGGTTTCTTCGAGAAGCCGTCCGGCGATGTTGCGATTTTGCTAGAGTACATGGACTCGGGGACGCTGGACACTCTGCTAAAGAAAAACGGCACCTTCTCTGAATCCCAACTCGCGGCGGTGGCGCGTCAAGTTCTCAATGGGCTGAGCTATCTCCACGCGAACAACGTCATCCACCGCGATATCAAACCATCGAATCTTCTAGTGAATCAGAATATGGAAGTGAAGATCAGTGACTTCGGAGTCAGCAAGGTCATGTGCCGGACGTTGGACGCGTGCACTTCATACGTCGGTACATGCGCGTACATGAGCCCGGAAAGGTTCGACCCGGATAGATATGGAGGGAATTATAACGGGTATGCGGCTGATATATGGAGCTTGGGTCTCACGTTGTTTGAACTCTATGTGGGTCATTTTCCGTTTCTTCCGGCAGGTCAGAGACCCGATTGGGCCACCTTGATGTGTGCCATTTGTTTTGGCGATCCACCTACCTTGCCAGAGAGTGCGTCCGACGAGTTTCAGAGCTTCGTGCAGTGTTGCTTGAAGAAGGAATCAAACGAGAGGTGGACAGCATCTCAGCTTTTGACCCACCCATTTCTATGTCAACCATAA 939 0.5346 MAVVRQRRQLNLCLVLPEPSDRRRLFPLPTASSSTVFSSAADITPNDIEKLEVLGHGNGGTVYKVRHKRTSAIYALKDVPSGSDPITCRQVRREMDILRRTDSPYVVQFHGFFEKPSGDVAILLEYMDSGTLDTLLKKNGTFSESQLAAVARQVLNGLSYLHANNVIHRDIKPSNLLVNQNMEVKISDFGVSKVMCRTLDACTSYVGTCAYMSPERFDPDRYGGNYNGYAADIWSLGLTLFELYVGHFPFLPAGQRPDWATLMCAICFGDPPTLPESASDEFQSFVQCCLKKESNERWTASQLLTHPFLCQP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00036 312 Gene3D Transferase(Phosphotransferase) domain 1 130 312 - -
Pral4375g00036 312 CDD PKc_MAPKK_plant_like 46 309 - -
Pral4375g00036 312 Pfam Protein kinase domain 49 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00036 312 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 40 310 - -
Pral4375g00036 312 SUPERFAMILY Protein kinase-like (PK-like) 45 310 IPR011009 -
Pral4375g00036 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pral4375g00036 312 SMART serkin_6 48 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00036 312 FunFam Mitogen-activated protein kinase 2 129 312 - -
Pral4375g00036 312 ProSiteProfiles Protein kinase domain profile. 48 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00036 312 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Pral4375g00036 312 Gene3D Phosphorylase Kinase; domain 1 29 128 - -
Pral4375g00036 312 PRINTS Tyrosine kinase catalytic domain signature 231 253 IPR001245 GO:0004672|GO:0006468
Pral4375g00036 312 PRINTS Tyrosine kinase catalytic domain signature 160 178 IPR001245 GO:0004672|GO:0006468
Pral4375g00036 312 PRINTS Tyrosine kinase catalytic domain signature 124 137 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00036 Pral-Chr4375 249166 250256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00036 1 309 MAP Kinase Kinase Gene Family AT1G73500 63.548 6.51e-137 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pral4375g00036 Pkinase 6.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00036 K20604 - qsa:O6P43_008459 500.36