Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00021 ATGGCTGACGTCGTACGTCAACGCCGGCCTCCCAACCTCCGCCTTAAGCTGCCGGAGCCCTCCCCTTGCTTCCCCATCCCCACCATCTCCTCCGCCACAGACCTCACTCCTAACGACGTTGAAAAGCTTCAAGTTCTTGGCCACGGAAATAGTGGCACAGTCTACAAGGTTCGCCACAACCGCACTTCTAACATCCACGCTCTGAAGGTCGTCCATGGCAGTTCCGACACAATGATTTCCCGCCAGGTCCAGCGGGAGATAGACATCCTCCGACGGACGGACTCCCCAAATGTAGTAAAGTTCCACGGTTTCTTTGAGACGCCGTCCGGCGATGTGGGGATATTGCTAGAGTACATGGACTTGGGAACGTTGGACACGCTGCTGAAGAACAACGGCACCTTCTCTGAGTCTCAACTCGCAGCGGTGGCGCGTCAAGTTCTCTCTGGGCTGAGCTATCTCCACGATAAAAAGATCATCCACCGCGATATCAAGCCATCAAATCTCCTAGTGAATCAAAAGATGGAAGTAAAGATCAGCGATTTCGGAGTCAGCAAGGTTTTGTCTAGGACGTTGGACACGTGCAATTCATACGTTGGTACATGCGCGTACATGAGCCCGGAACGGTTCGACCCGAATAGTTATGGCGGGAATTATAACGGGTATGCGGCTGATATATGGAGCTTAGGGCTCACCTTATTTGAACTCTATGTGGGTCACTTTCCCCTTCTAGAGGAGGGTCAGAGACCCGATTGGGCTCAATTGATGTCTGCCATTTGTTTCAACGAACCACCAACCTTGCCGGAGAGTGCGTCCGACGACTTTCGGAGCTTCATGGAGTGCTGCTTGAAGAAGGAATCAAGTGAGAGATGGACAGCGTCTCAGCTTTTGGCCCACCCGTTTCTATGTCCACAATAA 915 0.5235 MADVVRQRRPPNLRLKLPEPSPCFPIPTISSATDLTPNDVEKLQVLGHGNSGTVYKVRHNRTSNIHALKVVHGSSDTMISRQVQREIDILRRTDSPNVVKFHGFFETPSGDVGILLEYMDLGTLDTLLKNNGTFSESQLAAVARQVLSGLSYLHDKKIIHRDIKPSNLLVNQKMEVKISDFGVSKVLSRTLDTCNSYVGTCAYMSPERFDPNSYGGNYNGYAADIWSLGLTLFELYVGHFPLLEEGQRPDWAQLMSAICFNEPPTLPESASDDFRSFMECCLKKESSERWTASQLLAHPFLCPQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00021 304 Gene3D Phosphorylase Kinase; domain 1 26 120 - -
Pral4375g00021 304 ProSiteProfiles Protein kinase domain profile. 40 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00021 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Pral4375g00021 304 SUPERFAMILY Protein kinase-like (PK-like) 18 302 IPR011009 -
Pral4375g00021 304 Pfam Protein kinase domain 41 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00021 304 Gene3D Transferase(Phosphotransferase) domain 1 122 304 - -
Pral4375g00021 304 CDD PKc_MAPKK_plant_like 38 301 - -
Pral4375g00021 304 FunFam Mitogen-activated protein kinase 2 121 304 - -
Pral4375g00021 304 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 36 302 - -
Pral4375g00021 304 SMART serkin_6 40 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00021 Pral-Chr4375 157013 157927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00021 4 301 MAP Kinase Kinase Gene Family AT1G18350 59.344 1.39e-129 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pral4375g00021 Pkinase 2.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00021 K20604 - twl:119986423 459.529