Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00020 ATGGATGGGGATAATGGCCTTGACATCCGAAATTGGGGTTACTATGAACCCACAACTTCCTTTAAGAATCATCTCGGACTCCAGCTTATGTCTTCCATGCCTGAAAAACCCATGCTTGGAGGGCGCAATGCTGCAGTTTTGTCCGGAAACAATGTGGCATTTCACCATAGGACCATTGGGTTGCCACAAGCAACTTACCCTATGGACTACATGAGGGAAGCTTGGATTAGTCAAAGAGAGAAGTTTTTGAACATGATTCCAACAAACCCGGCAAACTATGCGGTTCTTCCAGAGACATCTTCAGCCCATCACATGCAGTTGGCTCAACCTCCTGACTTGACGAAGGAAGAAAGACCGGTGGAAGAGGCACCTGTTGAGAAGACTAATGGCACTAGTAAGAAAAGGCAGGGTCCCAAGGTACCCAAATCTCCCAAGGCAAAGAAGCCCAAGAGAGGACCTCGTACGCCGAAGGATGAGAATAATCTTTCTGTTCAACGAGCAAGGTCTGCAAAGAAAACTACTGAAATCGTAATAAATGGGATTGATATGGATATCTCGAGTATTCCTATTCCAGTTTGTTCATGCACTGGGACGCCTCAACAGTGTTACAGATGGGGTTCTGGTGGGTGGCAATCTGCTTGTTGCACAACAAATATGTCAATGTATCCATTGCCTATGAGTACAAAGCGGCGGGGTGCTAGGATAGCTGGGAGGAAAATGAGTATAGGAGCATTTAAGAAAGTCTTAGAGAAGCTTGCAGCTGAGGGTTATAACTTCTCTAATCCAATCGATTTGAGGACTTATTGGGCAAAACATGGCACTAACAAGTTTGTCACTATCAGGTAG 846 0.4539 MDGDNGLDIRNWGYYEPTTSFKNHLGLQLMSSMPEKPMLGGRNAAVLSGNNVAFHHRTIGLPQATYPMDYMREAWISQREKFLNMIPTNPANYAVLPETSSAHHMQLAQPPDLTKEERPVEEAPVEKTNGTSKKRQGPKVPKSPKAKKPKRGPRTPKDENNLSVQRARSAKKTTEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTNMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00020 281 PANTHER - 1 281 IPR010409 -
Pral4375g00020 281 MobiDBLite consensus disorder prediction 110 133 - -
Pral4375g00020 281 MobiDBLite consensus disorder prediction 102 170 - -
Pral4375g00020 281 Pfam GAGA binding protein-like family 1 281 IPR010409 -
Pral4375g00020 281 SMART GAGA_bind_2 1 281 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00020 Pral-Chr4375 151908 153514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00020 1 281 BBR or BPC Transcription factor family AT2G01930 52.365 8.13e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pral4375g00020 GAGA_bind 3e-112 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00020 - - gmx:606296 472.241