Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00018 ATGAGCGCATCGACGACGAGGAAGAAGGTTCAGCGTAAGTGTAAGATCAGAGGCTACACTCTCAAAGTAGACGCTCTTGATGAGATCCTTTCCTTCGTAAGTCGATTTGATGCCGCTGATGAAGATGAAGCTATCGATCTCCTCCTCGATCAGCTCGAACACGAATCATTGAAATCTACAATAATCGACAAAGAACCGGTGCATCGTGTGGTGAGCCTGCTGTTAGAAGCGGAAGCAGCGGTTGAGGAGAGCTCTGATGCTGTTGGCATTGGTTCAGTCTTTCGTGTCGTCGATGCATTCTTAGTCCCTAAATTTCGATACGACCCTATCAAAAAGCAATTCTACGAGCATACAAACAGCTTACCTATTCATGGGGAAGCATCGGCAAAAGCGGCTCTGTACAGGGACAGATTTCTGTTGCTGTTCCAGAGGCTCTCTCGTGACCAGCATTTTGCAAAGCCTGCTTTTGATTCTGAGTCTTCGTATTTTGGAAGCTGTGAGATATCTCCCATCCAATCTCTGGTTGGGCAAACTGGTAGAAGATGGATCATGGGAGTGATATCACAGCTGGAGGATGGGCATTTTTATTTAGAAGACCTAACTGCTTCGGTTGAAATCAATTTATCTACTGCTAAGATAACTACAGGATTCTTTACAGAGAACACCATAATTGTGGCAGAAGGTGAGATGCTGGTCTTAACATGTGGATTCCCCCCATTGGAGGATAGAGGCAAGTCACTAAAATTAAGCGGGGGACATGACTTTTTTGGAGGTGGCACTTATACTAAAGAGGAAACTATCAGACTAGCAGAGATGGAAAAGAGAGCAGTCAATGACATGTTTGTTATAGTGTCTGATATCTGGCTAGACAGTGAAGAGGCTATGGGAAAGCTGAAGATTGTCCTGGATGGTTTTGAGAGTGTGGAAGTGGTCCCTTCCTTGTTTGTTTTCATGGGAAACTTTTCTTCTCATCCATGTAACCTTTCTTTTCATTCTTACTCAAACCTCCGGTTGCAGTTTGGTAAGCTAGGGGAAACGATTGCTGCCCATCCACGGCTAATAGAGAAAAGTCGATTTTTGTTCATCCCAGGTCCTGATGATCCAGGTCCTTCAACAGTTCTACCTAGATGTGCTCTGCCAAAATATTTAACTGAGGAACTCCGGAAGCATGTTCCCAATGCCATATTTTCAAGCAATCCTTGCAGGATCAAATTTTACACTCAAGAGATTGTATTTTTCCGCCAGGATTTGCTGTATAGAATGCGCCGATCATGTTTAATGCCACCTTCTATGGAAGAAACTGATGATCCCTTTCAGCATCTTGTTGCTACCATAACCCATCAGAGCCATCTCTGTCCATTGCCTCTAACAGTACAACCCATCATCTGGAACTATGATCACTGCCTATATCTTTATCCCACTCCACATACGATAATTTTGGGAGACAGAAGTGAGCAAAAAGCCTTCAAATACACAGGAATCACTTGTTTTAATACCGGTTCCTTCTCAATTGACAGCACCTTTGTGGCATACCGGCCATGCTCTCAGGAAGTAGAATTGTCAGCCTTGTAA 1572 0.4389 MSASTTRKKVQRKCKIRGYTLKVDALDEILSFVSRFDAADEDEAIDLLLDQLEHESLKSTIIDKEPVHRVVSLLLEAEAAVEESSDAVGIGSVFRVVDAFLVPKFRYDPIKKQFYEHTNSLPIHGEASAKAALYRDRFLLLFQRLSRDQHFAKPAFDSESSYFGSCEISPIQSLVGQTGRRWIMGVISQLEDGHFYLEDLTASVEINLSTAKITTGFFTENTIIVAEGEMLVLTCGFPPLEDRGKSLKLSGGHDFFGGGTYTKEETIRLAEMEKRAVNDMFVIVSDIWLDSEEAMGKLKIVLDGFESVEVVPSLFVFMGNFSSHPCNLSFHSYSNLRLQFGKLGETIAAHPRLIEKSRFLFIPGPDDPGPSTVLPRCALPKYLTEELRKHVPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIILGDRSEQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00018 523 PIRSF DNA_pol_epsilon_2 1 523 IPR016266 GO:0003677|GO:0006261|GO:0008622
Pral4375g00018 523 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 4 523 IPR016266 GO:0003677|GO:0006261|GO:0008622
Pral4375g00018 523 Pfam DNA polymerase alpha/epsilon subunit B 281 486 IPR007185 GO:0003677|GO:0006260
Pral4375g00018 523 Gene3D - 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00018 Pral-Chr4375 132457 137264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00018 17 480 Core DNA Replication Machinery Family AT5G22110 71.277 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00018 K02325 - qsa:O6P43_008430 907.901