Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00013 ATGGAAATGCAGGACCATATAGAAGGAATAAAGTTGAATAGCTCTGGCAATGCTAGCAATAACCATTACAACAATGGCACAAAATCTGGAAATGTTGACCTATTGAATGATCAAACTCCTAATGGAAACAGCCATCCTCCTAAGGTGAGGAAACCATATACCATTTCCAAGCAAAGAGAAAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTGGAGGCTTTGAAATTGTATGGTCGTGGTTGGCGACAAATTGAAGAACACATAGGTACAAAGACTGCAGTTCAGATTCGAAGCCATGCCCAGAAGTTCTTCTCTAAGGTTGCCCGGGAATCTGATGGCGCTTCTGAAAGTCCTATAAAACCAAGTGATATACCTCCTCCTCGGCCAAAGAGGAAACCCCTACATCCATATCCCCGTAAATCAGTTGACTCTGGCAAAAGACTGTCCATTGCAAATGAAGCGCAAAGATCCCAATCCCCAAACCTGGCAGTTGCAGAGAAAGACACCCAGTCTCCGACCTCGGTCCTATCTGCATCTAATTCAGAAGTGTTTGGATCAGCATCCCCAGAGCAGCCTAACAGATGTCAATCACCTAATTCTTGTGCCACTGATGTCCACTCATCCAACTTATCACCATCACCCGTTGAAAAGGAAAATGATTGCATGACATTTGACTCTTCTGTGGAGGAAGAGAAGGGATCTCTTGCTTCACTCTCTTTATCTGCTGGTTTGAACTTAAATGTGCTGTCAACGAAGTCTGAGTTGAGTTCCAAGGATATTGAATCTTCTATTGAAGATGCTACCAACGTGGCCCATATTACAAGTATTAAGCTGTTTGGAAGAACTATTCAGATGGTAGATAATCAGAAGTTACTTGATGTAGATGGGGAGAATATCAAGGCAATTGCAAGCAAGTCTGATCATGTAGATGACGTTGAGAACGAAAAGCTTGGCCAATCGTGGGCGATCCAGCCAACTAGATTAACAACTATCACGAGGATGACAGAGAAGGACACTTCCTGTACTGGTTCGAATGCTGGAACTGGCTGTGAAATGGACAATGGAGACAGGAACTCAGATGCTGATGATTCTCAAAGCCAGTTGTCTCATCGGGAGGGAGAAAATGTACCCCGCAGAGAGCCTCCAAGAGGTTTTGTACCATATAAAAGATGTTTGGCCGAGAGAGATGCAAATTCAGCTTTTGTTGCATTGGAAGGGACGAAGGGGCAACGAGCTAGGGTATGCTTATAG 1251 0.4412 MEMQDHIEGIKLNSSGNASNNHYNNGTKSGNVDLLNDQTPNGNSHPPKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVARESDGASESPIKPSDIPPPRPKRKPLHPYPRKSVDSGKRLSIANEAQRSQSPNLAVAEKDTQSPTSVLSASNSEVFGSASPEQPNRCQSPNSCATDVHSSNLSPSPVEKENDCMTFDSSVEEEKGSLASLSLSAGLNLNVLSTKSELSSKDIESSIEDATNVAHITSIKLFGRTIQMVDNQKLLDVDGENIKAIASKSDHVDDVENEKLGQSWAIQPTRLTTITRMTEKDTSCTGSNAGTGCEMDNGDRNSDADDSQSQLSHREGENVPRREPPRGFVPYKRCLAERDANSAFVALEGTKGQRARVCL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00013 416 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Pral4375g00013 416 CDD SANT 61 104 IPR001005 -
Pral4375g00013 416 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Pral4375g00013 416 SMART sant 58 106 IPR001005 -
Pral4375g00013 416 MobiDBLite consensus disorder prediction 337 384 - -
Pral4375g00013 416 MobiDBLite consensus disorder prediction 337 352 - -
Pral4375g00013 416 MobiDBLite consensus disorder prediction 106 219 - -
Pral4375g00013 416 MobiDBLite consensus disorder prediction 1 54 - -
Pral4375g00013 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Pral4375g00013 416 PANTHER SWI/SNF COMPLEX-RELATED 30 296 - -
Pral4375g00013 416 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Pral4375g00013 416 MobiDBLite consensus disorder prediction 148 216 - -
Pral4375g00013 416 MobiDBLite consensus disorder prediction 125 142 - -
Pral4375g00013 416 Gene3D - 61 108 - -
Pral4375g00013 416 SUPERFAMILY Homeodomain-like 53 108 IPR009057 -
Pral4375g00013 416 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Pral4375g00013 416 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Pral4375g00013 416 MobiDBLite consensus disorder prediction 10 45 - -
Pral4375g00013 416 MobiDBLite consensus disorder prediction 355 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00013 Pral-Chr4375 104657 108216 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4375g00013 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00013 - - pcin:129319842 371.703