Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00002 ATGAGGCTCTCCTGTGAGGCTATCTTCGGTGGACTCACTCCTAAAGTTACTGCTTCGTTCTCCAACAGGGACTGGGTTCCTTTCCAAAAGCATCTTGTCAATTTGAAAACCTTTTCTTCTGTCTCTTTCCGCCATAGAAAATGGTTTGTGCTCATTTCACAGCCCAGCTTGGTGAAGAAGACGAAAGACAATTTTGGCAGAACTGGTTGTTCCACTTCTAGCCAATGCAATGCTTCTGTAGCTTTTGAGGGTGATTTCGTGGTGGTAAATTTTTACCATTTCGTGTTTATCGATGACCCGGAAGCAGAAGTCGCCAAGCACCTGGCGTTCATGGAGGGTCTTGACATAAATGGCAGAATTTACATAAATGAGCAAGGTATAAATGCGCAGTATAGTGGACCATCAAAAGATGCTCTGGCATATGTTGAATGGTTAAGGCAAGATGACAGATTTTCTGATATCCTGGTTCAGATTTCTCCATCACTAAAAGGGCATGCCTTCCCGAGATTGAAGTTGCGGTATAAGCCCTCACTTGTACAGTTGGAAGGTGGCATATCACATCTTCCTCTTCTTGATTCTTCAATGCGAGCAACACCTTTAGCGCCATCAGAATGGAGAAATAGATTGGAAGCAATGAATAGGACTGGTCTTGCTTCAAAAGAGTGTCCTGACACCAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGTGCTGTGCGCCCTAATGTAGACTGCTTTAGAAGCACTTCATTTGGCTTGTCCCAGGAAGAGGTGGCTGCCTCAGATCCTTTAGCAAATGTAGATAAAGAAAAAACGAATATATTGATGTACTGCACTGGAGGGATTCGTTGTGATGTATATTCCACAATACTGAGAAAGAAGGGCTTTCGGAATCTGTACACCTTGCAGGGAGGTGTTTCTAACTATCTAGAGAATGAAGGTCCTGCGGAATGGGTAGGAAATCTATTTGTGTTCGACTCTCGTCTGTCTCTGCCTCCTTCGTCATACCATCCTGGAGCCACAACTGAAACAGGCAGCACTCACGTCTCTGCAAATGGTCAGTTTGCGAAATGCTACATATGTGATTCTCAAGTCAGTGAATTGAGGCATAGGAACTGTGCAAATCTTGACTGCAATTTGCTTTTCCTATGCTGCAGAAAATGTGTAAAAGATGCAAGGGGATGCTGTTGTTGGAGTTGCACAACTGCTCCTAGACTTAGGCCTGTCTTAGACGGAGATCAGAGATACCAAAAATGGCACATCTATCGTGATATTGATGAGCAGACCACCGTAACAACTTGA 1326 0.4367 MRLSCEAIFGGLTPKVTASFSNRDWVPFQKHLVNLKTFSSVSFRHRKWFVLISQPSLVKKTKDNFGRTGCSTSSQCNASVAFEGDFVVVNFYHFVFIDDPEAEVAKHLAFMEGLDINGRIYINEQGINAQYSGPSKDALAYVEWLRQDDRFSDILVQISPSLKGHAFPRLKLRYKPSLVQLEGGISHLPLLDSSMRATPLAPSEWRNRLEAMNRTGLASKECPDTNYILLDVRNGYEWDIGHFRGAVRPNVDCFRSTSFGLSQEEVAASDPLANVDKEKTNILMYCTGGIRCDVYSTILRKKGFRNLYTLQGGVSNYLENEGPAEWVGNLFVFDSRLSLPPSSYHPGATTETGSTHVSANGQFAKCYICDSQVSELRHRNCANLDCNLLFLCCRKCVKDARGCCCWSCTTAPRLRPVLDGDQRYQKWHIYRDIDEQTTVTT 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00002 441 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 83 423 IPR020936 -
Pral4375g00002 441 Pfam Rhodanese-like domain 225 319 IPR001763 -
Pral4375g00002 441 SMART rhod_4 206 323 IPR001763 -
Pral4375g00002 441 Pfam Rhodanase C-terminal 328 409 IPR022111 -
Pral4375g00002 441 Gene3D - 75 179 - -
Pral4375g00002 441 Pfam UPF0176 acylphosphatase like domain 87 176 IPR040503 -
Pral4375g00002 441 Gene3D - 191 350 IPR036873 -
Pral4375g00002 441 ProSiteProfiles Rhodanese domain profile. 223 326 IPR001763 -
Pral4375g00002 441 CDD RHOD_YceA 200 319 - -
Pral4375g00002 441 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 225 338 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00002 Pral-Chr4375 20741 24692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00002 85 438 Sulfurtransferasese or Rhodanese AT1G17850 68.132 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00002 - - gmx:100814358 607.446