Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4374g00003 ATGAAGCTCTCCTGTGAGGCTATCTTCGGTGGACTCACTCCTAAAGTTACTGCTTCGTTCTCCTACAGGGACTGCGTTCCTTTCCAAAAGCATCTTCTCAATTTGGAAACCTTTTCTTCTGTCTCTTTCCGCCATAGAAAATGTCGTGGTGGTAATTTTTACCATTTCGTGTTTATCGATGACCCGGAAGCAGAAGTCGCCAAGCACCTGGCGTTCATGGAGGGTCTTGACATAAATGGCAGAATTTACATAAATGAGCAAGGTATAAATGCGCAGTATAGTGGACCATCAAAGAATGCTCTGGCATATGTTGAATGGTTAAGGCAAGATGACAGATTTTCTGATATCCTGGTTCAGATTTCTCCATCACTAAAAGGGCATGCCTTCCCGAGATTGAAGTTGCGGTATAAGCCCTCACTTGTACAGTTGGAAGGTGGCATATCACATCTTCCTCTTCTTGATTCTTCAATGCGAGCAACACCTTTAGCCCCATCAGAATGGAGAAATAGATTGGAAGCAATGAATAGGACTGGTCTTGCTTCAAAAGAGTGTCCTGACACCAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGTGCTGTGCGCCCTAATGTAGACTGCTTTAGAAGCACTTCATTTGGCTGGTCCCAGGAAGAGGTGGCTGCCTCAGATCCTTTAGCAAATGTAGATAAAGAAAAAACGAATATATTGATGTACTGCACTGGAGGGATTCGTTGTGATGTATATTCCACAATACTGAGAAAGAAGGGCTTTCGGAATCTGTACACCTTGCAGGGAGGTGTTTCTAACTATCTAAAGAATGAAGGTCCTACGGAATGGGTAGGAAATCTATTTGTGTTCGACTCTCGTCTGTCTCTGCCTCCTTCTTCATACCATCCTGGAGCCACAACTGAAACAGGCAGCACTCAAGTCTCTGCAAATGATCAGTTTGCGAAATGCTACATATGTGGTTCTCAAGTCAGTGAATTGAGGCATAGGAACTGTGCAAATCTTGACTGCAATTTGCTTTTCCTATGCTGCAGAAAATGTGTAAAAGATGCAAGGGGATGCTGTTGTTGGAGTTGCACAACTGCTCCTAGACTTAGGCCTGTCTTAGACGGAGATCAGAGATACCAAAAATGGCACATCTATCGTGATATTGATGAGCAGACCACCGTAACAACTTGA 1212 0.434 MKLSCEAIFGGLTPKVTASFSYRDCVPFQKHLLNLETFSSVSFRHRKCRGGNFYHFVFIDDPEAEVAKHLAFMEGLDINGRIYINEQGINAQYSGPSKNALAYVEWLRQDDRFSDILVQISPSLKGHAFPRLKLRYKPSLVQLEGGISHLPLLDSSMRATPLAPSEWRNRLEAMNRTGLASKECPDTNYILLDVRNGYEWDIGHFRGAVRPNVDCFRSTSFGWSQEEVAASDPLANVDKEKTNILMYCTGGIRCDVYSTILRKKGFRNLYTLQGGVSNYLKNEGPTEWVGNLFVFDSRLSLPPSSYHPGATTETGSTQVSANDQFAKCYICGSQVSELRHRNCANLDCNLLFLCCRKCVKDARGCCCWSCTTAPRLRPVLDGDQRYQKWHIYRDIDEQTTVTT 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4374g00003 403 Pfam Rhodanase C-terminal 290 371 IPR022111 -
Pral4374g00003 403 CDD RHOD_YceA 162 281 - -
Pral4374g00003 403 Pfam Rhodanese-like domain 187 280 IPR001763 -
Pral4374g00003 403 Gene3D - 36 141 - -
Pral4374g00003 403 SMART rhod_4 168 285 IPR001763 -
Pral4374g00003 403 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 187 301 IPR036873 -
Pral4374g00003 403 ProSiteProfiles Rhodanese domain profile. 185 288 IPR001763 -
Pral4374g00003 403 Gene3D - 153 313 IPR036873 -
Pral4374g00003 403 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 52 385 IPR020936 -
Pral4374g00003 403 Pfam UPF0176 acylphosphatase like domain 53 138 IPR040503 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4374g00003 Pral-Chr4374 15423 19362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4374g00003 52 400 Sulfurtransferasese or Rhodanese AT1G17850 67.688 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4374g00003 - - gmx:100814358 592.038