Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4371g00037 ATGGCAAGTCGAGAACTACTATCCCCCTCCTTTTCCGGTGAATGGACTTACGATGTATTCCTTAGTTTTAGAGGTGAAGATACCCGCACCAATTTTACCGGCCATCTCTACAATTCTCTAAAACAAAAGGGTATTCAAACCTTTATCGATGATGTGGGCCTCCAAAGAGGGGAAGAAATAACTCCGGCTCTTCTGGAAGCCATCCGACAATCCAGGATTGCCATCATCGTTTTCTCCAAAAATTATGCATCCTCCACTTTCTGCCTTGATGAACTTGTCAACATACTTCACTACGTCAGAGGAGAAGGTCGGTTGGTCTGGCCGGTGTTCTACGATGTTGATCCATCAGATGTCCGACACCAGCGTGGGAGTTACGGACAGGCGTTGGCAGAACACGATGATCGACTCCAAGCCAACAAGGAGAAAGTGAGGAAGTGGAGGGAGGCTTTATGTGTGGCGGCTAACCTATCTGGCTGGCATTTCCAACATGGATCTCAACCTGAATATGAATTTATAAGTGGGATCATTGAAGAGGTATCCAAAAAGATCAATCGCGTTCCTTTACATATAGCTAATCACCCTGTTGGACTGGAATCGTCCGTTCAAGAAGTGATCTCACTTCTGGAACTTGAGTCTCATAAGGGGATTAACATGGTAGGGATATGTGGAATCGGTGGAGTAGGTAAAACAACAGTTGCACTGGCTGTTTATAACCTCATCGGTGATCAATTTGAAGGTCTATGTTTTCTTGCTGATATTAGAGAGAAGGCTATTGGCATGCATGGACTTGTGCAACTCCAAGAGACGCTACTTTCTGAAGTGATTGCAGAAAACAATCTAAGAATTGGAAATGTTCATAGAGGAATTTCCATCATAAAAAAAAGGCTCCGCCGGAAGAAGGTTCTTTTGATTCTTGATGACATTGATAAGCTTAAACAGTTGCAGGTACTTGCCGGAGGATCTGATTGGTTTGGATCTGGCAGTAGGATCATTGTCACGACAAGAGATAATCATTTGCTTAGTACTCATGGGGTAGAAAAATTATGTGAGGTGAAGGGGCTAAATTTCAATGAATCCCTTGAATTGCTGAGCTGGAATGCCTTTAAGAGTAACAGGGTTGATCCAGATTACATGGACGTTTCTAACCGTGCAGTCTCCTATGCTGGTGGCCTTCCGTTGGCTTTGGAAGTAATAGGGTCTGACCTATTTGATAGAAGTACAGAAGAATGGAATTCTCAGCTAGACAAGTACGCAAGAATCCCTCATAAAGATGTCCATGAAATCCTGAAAGTAAGCTATGATAGTTTGGAAGAGAATGAGAAGGAAATTTTCCTTGATATTGCTTGTTTCTTTAATAAATCAGAACTGACTTACACCAAGGAAATGCTCTATGCACATGGCTTAGATGGAGGCATTGGAATTACAGTCTTAATGGACAAATCTCTCATCAAGATCGACAATTCAAACTGTGTGAGAATGCATGACTTAATCCAAGACACGGGCAGAGAAATTGTGAGACTGGAATCAACATCTGAGCCTGGCAAGCGAAGTAGGTTGTGGCGCGGTGAGGACATTGTTCATGTTTTGGAAGAAAACACGGGAACTGAGAAAATTGAAGTTATTATGCTTCACTCGTGCAAATATAAGGAAGTGCAATGGCGTGGAGTGGCATTCAAGAAGATGAAAAACCTGAGAATCCTTATTATTGAAAATGTACGCTTTTCCAGAGGCCCCGAATATCTCCCAAATACTTTGAGAGTATTGGACTGGAGCGGATATCCGTCATCATCTTTACCATCTGATTTTAACCCCAGGAATCTTCTCATACTCAGCCTACCTGAATGCTGCCTTCAAATTTTCAAACCACGAAAGGGGTTTCATTCTTTATGTCTCATGGATTTTGAAGGCTGTAAATGCTTGACACAAGTACATGACCTATCTGGACTGCCTAACTTGGGAGCGTTGTGTCTTGATAATTGTACAAATCTGATTAGTATTCATGAATCAATTGGGTTTCATGATAAGCTCAGATTGTTGAGTGCCCAAGGTTGCACTCAGCTTAAAATGTTAGCAACCCGCATCAATATGACTTCTCTTGAGACTGTGGACCTCAGGGGTTGCTCAAGTTTTTGGAAGTTCCCAGAAGTATTGAGACACATGGAGAATATAAGAGAAATTTATTTGGATCACACTGCCATAAAAGAACTTCCATTTTCAATTGGAAAACTTATTGGATTGAAACGGCTATACTTGAGGCGTTGTCCACGGCTTAGACAGCTGCCAAGCAGCATATTCACAATCCCCAAACTCGAGGTGGTGCTGTCTTACAGGAGCAGAGGATTTCAGTTATTTGGAGGGGATGAAATTCGAGAAAAACAGAGGTCAGAAATGTCTTTTCCCACGATTGTACTCTATTCTCTACCAGATTCTGGCAATCGAGGTAGTAGGTGCCCTCGGTTCGATCATTGCCCTAATGGGTACTGTATAAGCAAAAGCGAAGCAAATTTCGTTCAAATATTTCCCCTACCAGAAACTTTGGTTAGTTTTGTTCCGCTTTCCATCACTAGCATCGGATTTCCCCTTTTTGGGGCCCTCTTTAATATCTTCCCGATGATGGAGAACCAAAAGGCAATATCAACAGCCTTCTATGCAAGCAGAGAATCATCAGTTTCTTTCTGGTTCCGTGAGAATTTCCCAAAGATAGCCATATGTGTGACTGGGGGATCAGGCACAGAAATAGAGGACTCAATCTTGGACATTAGGCTGAGAGTTTTTGTCAATGGTTCTGAACAACTTGTTTATTTGTGCAATTACATTGTTTGTAAACAAAAAATGGCAAAACATATGATTTGGTGTGGCTTGCGATGCAAACCCGATAGGGTGATTTCAACACATAAATGGAATCATGTTCAGGTTTCGTGGGAGTTGAAGTACCACAGGCCATATGATCCTCATAGGGTAATTTCAGACGACAATGGAACCCCAACAACCGAAATAGATTTGTCTGGAATTCATGTCTATGGGGAAGAAAACAGCAGCATTGAAAATATCCGGTTCACAAACCCTGATATCCCTCTGTCTCTGGTTGAAACGATGAGAAATGACCGTATAATCTATTTTCAGGACACATCGTCTCACTGGGATAGCAAGTTGCTCAAACCGATGAAAGGCATAGATCTATGTTCCATCTTTTGCAGGACAATATCTTTGTCAGTTACATAA 3222 0.4199 MASRELLSPSFSGEWTYDVFLSFRGEDTRTNFTGHLYNSLKQKGIQTFIDDVGLQRGEEITPALLEAIRQSRIAIIVFSKNYASSTFCLDELVNILHYVRGEGRLVWPVFYDVDPSDVRHQRGSYGQALAEHDDRLQANKEKVRKWREALCVAANLSGWHFQHGSQPEYEFISGIIEEVSKKINRVPLHIANHPVGLESSVQEVISLLELESHKGINMVGICGIGGVGKTTVALAVYNLIGDQFEGLCFLADIREKAIGMHGLVQLQETLLSEVIAENNLRIGNVHRGISIIKKRLRRKKVLLILDDIDKLKQLQVLAGGSDWFGSGSRIIVTTRDNHLLSTHGVEKLCEVKGLNFNESLELLSWNAFKSNRVDPDYMDVSNRAVSYAGGLPLALEVIGSDLFDRSTEEWNSQLDKYARIPHKDVHEILKVSYDSLEENEKEIFLDIACFFNKSELTYTKEMLYAHGLDGGIGITVLMDKSLIKIDNSNCVRMHDLIQDTGREIVRLESTSEPGKRSRLWRGEDIVHVLEENTGTEKIEVIMLHSCKYKEVQWRGVAFKKMKNLRILIIENVRFSRGPEYLPNTLRVLDWSGYPSSSLPSDFNPRNLLILSLPECCLQIFKPRKGFHSLCLMDFEGCKCLTQVHDLSGLPNLGALCLDNCTNLISIHESIGFHDKLRLLSAQGCTQLKMLATRINMTSLETVDLRGCSSFWKFPEVLRHMENIREIYLDHTAIKELPFSIGKLIGLKRLYLRRCPRLRQLPSSIFTIPKLEVVLSYRSRGFQLFGGDEIREKQRSEMSFPTIVLYSLPDSGNRGSRCPRFDHCPNGYCISKSEANFVQIFPLPETLVSFVPLSITSIGFPLFGALFNIFPMMENQKAISTAFYASRESSVSFWFRENFPKIAICVTGGSGTEIEDSILDIRLRVFVNGSEQLVYLCNYIVCKQKMAKHMIWCGLRCKPDRVISTHKWNHVQVSWELKYHRPYDPHRVISDDNGTPTTEIDLSGIHVYGEENSSIENIRFTNPDIPLSLVETMRNDRIIYFQDTSSHWDSKLLKPMKGIDLCSIFCRTISLSVT 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4371g00037 1073 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Pral4371g00037 1073 Coils Coil 129 149 - -
Pral4371g00037 1073 Gene3D - 181 347 IPR027417 -
Pral4371g00037 1073 Pfam NB-ARC domain 198 436 IPR002182 GO:0043531
Pral4371g00037 1073 Pfam TIR domain 17 186 IPR000157 GO:0007165
Pral4371g00037 1073 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pral4371g00037 1073 Gene3D - 13 180 IPR035897 -
Pral4371g00037 1073 PRINTS Disease resistance protein signature 388 402 - -
Pral4371g00037 1073 PRINTS Disease resistance protein signature 295 309 - -
Pral4371g00037 1073 PRINTS Disease resistance protein signature 218 233 - -
Pral4371g00037 1073 PRINTS Disease resistance protein signature 694 710 - -
Pral4371g00037 1073 SMART AAA_5 215 355 IPR003593 GO:0016887
Pral4371g00037 1073 Gene3D - 353 437 IPR042197 -
Pral4371g00037 1073 Gene3D Ribonuclease Inhibitor 694 781 IPR032675 -
Pral4371g00037 1073 Gene3D Ribonuclease Inhibitor 529 693 IPR032675 -
Pral4371g00037 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Pral4371g00037 1073 SMART till_3 16 156 IPR000157 GO:0007165
Pral4371g00037 1073 SUPERFAMILY L domain-like 492 772 - -
Pral4371g00037 1073 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Pral4371g00037 1073 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 778 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4371g00037 Pral-Chr4371 273825 278474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4371g00037 605 847 WRKY Transcription Factor Family AT4G12020 30.515 3.34e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4371g00037 - - ahf:112736348 1089.72