Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4371g00036 ATGGCAAGTCGAGAACTACCATCCCCCTCCTTTGCCGGTGAATGGACTTACGATGTATTCCTTAGTTTTAGAGGTGAAGATACCCGCACCAATTTTACTGGCCATCTCTACAATTCTCTAAAACAAAAGGGTGTTCAAACCTTCATCGATGATGTGGGTCTCCAAAGAGGGGAAGAAATCACTCCAGCTCTTCTCGAAGCCATCCGACAATCGAGGATTGCCGTCATCGTTTTCTCCAAAAATTATGCATCCTCTACTTTCTGCCTTGATGAACTCGTCAACATACTTCACTGCGTCAGAGGAGAAGGTCGGTTGGTCTGGCCGGTGTTCTACGATGTTGATCCATCAGATGTCCGACACCAGCGTGGGAGTTACGGACAGGCGTTGGCAAAACACGATGATCGATTCCAAGCCAACAAGGAGAAAGTGAGGAAGTGGAGGGAGGCTTTATGTGTGGCGGCTAACTTATCTGGCTGGCATTTCCAACATGGATCTCAACCTGAATATGAATTTATAAGTGGGATCATTGAAGAGGTATCCAAAAAGATCAATCGCGTTCCTTTACATATAGCTAATCACCCTGTTGGACTGGAATCGTCCGTTCAAGAAGTGATCTCACTTCTGGAACTTGAGTCTGATAAGGGGATTAACATGGTAGGGATATGTGGAATTGGTGGAGTAGGTAAAACAACAGTTGCACGGGCTGTTTATAACCTTATCGGTGATCAATTTGAAGGTCTATGTTTTCTTGCTGATATTAGACAGAAGGCTATTGGCGTGCATGGACTTGTGCAACTTCAAGAGACGCTACTTTCTCAAGTAGTTGCAGAAAAAAATCTCAGACTTGGAGATGTTCATAGCGGAATTTCAATCATAAAAAGAAGGCTCCGCCGGAAGAAGGTTCTTTTGATTCTTGATGATATTGATAAGCTTAAACAGTTGCAGGTACTTGCCGGAGGACGTGATTGGTTTGGATCTGGCAGTAGGATCATTGTCACGACAAGAGATAAACATTTGCTTAGTACTCATGGGGTAGAAAAATTATATGAGGTGAAGGGGCTAAATTTCAATAAATCCCTTGAATTGCTGAGCTGGAATGCCTTTAAGAATAACATGGTTGATCCACATTACATGGACGTTTCTAAACGTGCAGTCTCCTATGCTGGTGGCCTTCCGTTGGCTTTGGAAGTAATAGGGTCTGACCTATTTGATAGAAGTATAGAAGAATGGAATTCTCAGCTAGACAAGTACGCAAGAACCCCTCATGAAGATGTCCATGAAATCCTGAAAGTAAGCTATGATAGTTTGCAAGAGAATGAGAAGAAAATTTTCCTTGATATTGCTTGTTTCTTTAATAAATTAGAACTGACTTACACCAAGGAAATACTGTGTGCACATGGCTTACACGGAGACATTGGAATTAGAATCTTACTGGAGAAATCTCTCATCAAGATCGATAGTTCAAACTGTGTGAGAATGCACGACTTAATTCAAGACATGGGCAGAGAAATTGTTAGACTGGAATCAACATCTGAGCCTGGCAAGCGTAGTAGGTTGTGGCTTGATGAGGACATTGTTCATGTTTTGGAAGAAAACACGGGAAGTGAGAAAATTGAAGTCATAATGATTCACTCATGCAAATATAAAGAAGTGCAATGGAGTGGAGTGGCATTCGAGAAGATGAAAAACCTGAGAATCCTTATTATTGAAAATGTACGCTTTTCCAGAGGCCCCGAATATCTCCCTAATACTTTGAGAGTATTGGACTGGAGTGGATATCCGTCATCATCTTTACCATCTGATTTTAACCCCAGGAATCTTCTCATACTCAGCCTACCTGAATGCTGCCTTCAATTTTTCAAACCACCAAAGGTGTTTCATTCTTTATGTCTCATGGATTTTGAAGGTTGTAAATTCTTAACACGAGTACCTAAGCTATCTGGACTGCCTAACTTGGGAGCGTTGTGTCTTGATAATTGTACAAATCTGATTAGTATTCACGAATCAATTGGGTTTCTTGATAGGCTCAGATTGTTGAGTGCCCAAGGTTGCACTCAGCTTGAAATGTTAGCAACTCGCATCAATATGACTTCTCTTGAGACTCTGGATCTCAGGGGTTGCTCAAGTCTTTGGGAGTTCCCAGAAGTACTGGGACTCATGGAGAATACAAGAGACATTTATTTGGATCAGACTGCCATAAAAGAACTTCCAGTTTCAATTGGAAACCTTATTGGATTGAAACGGCTATACTTGAGGCGTTGTCCACAGCTTAGACAGCTACCAGGCAGCATATTCATGATCCCCAAACTCGAGGTGGTGCTGTCTTACAGGAGCAGAGGATTTCAATTATTTAGAGGGTATGAAATTCAAGAAAAACAGAGGTCCGAAGCGTCTTTGGCCAAGATTCTACTCTATTCTCTACCAGATTCTAGCAATCAAAGTATAAGGTACGCTAAGTTCGATCGCTGCCTTAATGGGTACTGTATAAGCAAAAGCGAAACAAATTTCGTTCAAATATTTCCTCTTCCACAAACTTTGGTTACTTTTGATCCGCTTTCCAGCACTAGCATCGGATGTCCTCCTTTTGGGGACCGCCCTACTACCCTCCCATTGTTGGAGAACAAAAAGACAACATTAAGAGCCTGCCGTGCAAGCAGCGAATCATCAGTTTCTTTCTGGTTCTGTGAGAATTTCCCAAAGATAGCCATATGTGTGATTGGGGCATCAGGCACAGAAATAGAGCCCGCAATCTTGGACATTAGGCTGAGAGTGTTTGTCAATGGTTCTGAACAACTTGTTTATTTGTGTAATTACATAATTTATGAACAAAAAATGCCAAAACATATGATTTGGTGTGGCTTGCGATGCAAACACAATAGGGTGATTTCAACACATAAATGGAATCATGTTCAGGTTTCGTGGGAGTTGAAATACCACAGGCCATATGATCCTCATAGGGTAATTTCAGACGACAATGGAATCCCAACAATGGAAATAGATTTGTCTGGAATTCATGTCTATGAGGAAGAAAGCAGCAGCATTGAAAATATGCGGTTCACAAACCCTGATATTTCTCTGTCTCAGGTTGAAACGATGCGAAATGACCATATAATCTATTTTCGGGGCACATCGTTTTACTGGAATGGCCGGTTGCTCAAACTGATGGAAGCAGGGAATTCAGCTCCTTTACTTAGTTTTGAAGAACTTCAGCAGATAGTTGGTTTTGAAAACTCGAGGCTGCTGTTGAATGTGGCCGACAAATTGGATCGATTGTGGAGTGGGACAAGACTAATCTTGCTTCTAAGGGGGGGACATGGCGGGATAGAAGTTACACGGGAGAAGATACATACGTTGTTGGATGCCCCCTATTACCGTGATGATAGTAATGTTCTGAGTACCCCTGTTGAAATTATCGTTGATGCCCCGACTACGGAGCAGAGAGAGGGGATATCTCATCGCCAGTTCATCAGCGACCAGAAGGAGCGTTGCTATCGTGTGACCTTTGTTTTTCGTTTTTTCGCCTGTGACCCCTTTGGATGGTCCCCACGAAATTCTGAAGTGGCAGCTTTGTCTCGACAACAATACGTTATACGACAACAAATGGAGCTTCTCAGAATGATTAACTTTGCAGTCACCGACGAAGTGCAGCCGAATTCCTACAGTACTCTGGAGTTTCAAACCCGCAATCTTGTGGGAATGGCACAACCAGCTTGA 3714 0.4246 MASRELPSPSFAGEWTYDVFLSFRGEDTRTNFTGHLYNSLKQKGVQTFIDDVGLQRGEEITPALLEAIRQSRIAVIVFSKNYASSTFCLDELVNILHCVRGEGRLVWPVFYDVDPSDVRHQRGSYGQALAKHDDRFQANKEKVRKWREALCVAANLSGWHFQHGSQPEYEFISGIIEEVSKKINRVPLHIANHPVGLESSVQEVISLLELESDKGINMVGICGIGGVGKTTVARAVYNLIGDQFEGLCFLADIRQKAIGVHGLVQLQETLLSQVVAEKNLRLGDVHSGISIIKRRLRRKKVLLILDDIDKLKQLQVLAGGRDWFGSGSRIIVTTRDKHLLSTHGVEKLYEVKGLNFNKSLELLSWNAFKNNMVDPHYMDVSKRAVSYAGGLPLALEVIGSDLFDRSIEEWNSQLDKYARTPHEDVHEILKVSYDSLQENEKKIFLDIACFFNKLELTYTKEILCAHGLHGDIGIRILLEKSLIKIDSSNCVRMHDLIQDMGREIVRLESTSEPGKRSRLWLDEDIVHVLEENTGSEKIEVIMIHSCKYKEVQWSGVAFEKMKNLRILIIENVRFSRGPEYLPNTLRVLDWSGYPSSSLPSDFNPRNLLILSLPECCLQFFKPPKVFHSLCLMDFEGCKFLTRVPKLSGLPNLGALCLDNCTNLISIHESIGFLDRLRLLSAQGCTQLEMLATRINMTSLETLDLRGCSSLWEFPEVLGLMENTRDIYLDQTAIKELPVSIGNLIGLKRLYLRRCPQLRQLPGSIFMIPKLEVVLSYRSRGFQLFRGYEIQEKQRSEASLAKILLYSLPDSSNQSIRYAKFDRCLNGYCISKSETNFVQIFPLPQTLVTFDPLSSTSIGCPPFGDRPTTLPLLENKKTTLRACRASSESSVSFWFCENFPKIAICVIGASGTEIEPAILDIRLRVFVNGSEQLVYLCNYIIYEQKMPKHMIWCGLRCKHNRVISTHKWNHVQVSWELKYHRPYDPHRVISDDNGIPTMEIDLSGIHVYEEESSSIENMRFTNPDISLSQVETMRNDHIIYFRGTSFYWNGRLLKLMEAGNSAPLLSFEELQQIVGFENSRLLLNVADKLDRLWSGTRLILLLRGGHGGIEVTREKIHTLLDAPYYRDDSNVLSTPVEIIVDAPTTEQREGISHRQFISDQKERCYRVTFVFRFFACDPFGWSPRNSEVAALSRQQYVIRQQMELLRMINFAVTDEVQPNSYSTLEFQTRNLVGMAQPA 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4371g00036 1237 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Pral4371g00036 1237 Gene3D - 354 437 IPR042197 -
Pral4371g00036 1237 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pral4371g00036 1237 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Pral4371g00036 1237 Gene3D - 181 347 IPR027417 -
Pral4371g00036 1237 SMART till_3 16 156 IPR000157 GO:0007165
Pral4371g00036 1237 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 775 IPR044974 GO:0006952
Pral4371g00036 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Pral4371g00036 1237 SUPERFAMILY "Winged helix" DNA-binding domain 424 530 IPR036390 -
Pral4371g00036 1237 SMART AAA_5 215 354 IPR003593 GO:0016887
Pral4371g00036 1237 Pfam NB-ARC domain 198 437 IPR002182 GO:0043531
Pral4371g00036 1237 Gene3D Ribonuclease Inhibitor 536 693 IPR032675 -
Pral4371g00036 1237 Gene3D Ribonuclease Inhibitor 694 779 IPR032675 -
Pral4371g00036 1237 SUPERFAMILY L domain-like 549 774 - -
Pral4371g00036 1237 Gene3D - 13 180 IPR035897 -
Pral4371g00036 1237 PRINTS Disease resistance protein signature 295 309 - -
Pral4371g00036 1237 PRINTS Disease resistance protein signature 218 233 - -
Pral4371g00036 1237 PRINTS Disease resistance protein signature 388 402 - -
Pral4371g00036 1237 PRINTS Disease resistance protein signature 694 710 - -
Pral4371g00036 1237 Pfam TIR domain 17 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4371g00036 Pral-Chr4371 248655 281855 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4371g00036 7 773 WRKY Transcription Factor Family AT4G12020 33.544 1.71e-107 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4371g00036 - - ahf:112736348 1096.26