Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4371g00034 ATGGCAAGTCGAGAACTACCATCCCCCTCCTTTGCCGGTGAATGGACTTACGATGTATTCCTTAGTTTTAGAGGTGAAGATACCCGCACCAATTTTACTGGCCATCTCTACAATTCTCTAAAACAAAAGGGTGTTCAAACCTTCATCGATGATGTGGGTCTCCAAAGAGGGGAAGAAATCACTCCAGCTCTTCTCGAAGCCATCCGACAATCGAGGATTGCCGTCATCGTTTTCTCCAAAAATTATGCATCCTCTACTTTCTGCCTTGATGAACTCGTCAACATACTTCACTGCGTCAGAGGAGAAGGTCGGTTGGTCTGGCCGGTGTTCTACGATGTTGATCCATCAGATGTCCGACACCAGCGTGGGAGTTACGGACAGGCGTTGGCAAAACACGATGATCGATTCCAAGCCAACAAGGAGAAAGTGAGGAAGTGGAGGGAGGCTTTATGTGTGGCGGCTAACCTATCTGGCTGGCATTTCCAACATGGATCTCAACCTGAATATGAATTTATAAGTGGGATCATTGAAGAGGTATCCAAAAAGATCAATCGCGTTCCTTTACATATAGCTAATCACCCTGTTGGACTGGAATCGTCCGTTCAAGAAGTGATCTCACTTCTGGAACTTGAGTCTGATAAGGGGATTAACATGGTAGGGATATGTGGAATCGGTGGAGTAGGTAAAACAACAGTTGCACGGGCTGTTTATAACCTTATCGGTGATCAATTTGAAGGTCTATGTTTTCTTGCTGATATTAGAGAGAAGGCTATTGGCGTGCATGGACTTGTGCAACTTCAAGAGACGCTACTTTCTCAAGTAGTTGCAGAAAAAAATCTCAGGCTTGGAGATGTTCATAGCGGAATTTCAATCATAAAAAGAAGGCTCCGCCGGAAGAAGGTTCTTTTGATTCTTGATGATATTGATAAGCTTAAACAGTTGCAGGTACTTGCCGGACGACCTGATTGGTTTGGATCTGGCAGTAGGATCATTGTCACGACAAGAGATAAACATTTGCTTAGTACTCATGGGGTAGAAAAATTATATGAGGTGAAGGGGCTAAATTTCAATAAATCCCTAGAATTGCTGAGCTGGAATGCCTTTAAGAATAACATGTTTGATCCACATTACATGGACGTTTCTAAACGTGCAGTCTCCTATGCTGGTGGCCTTCCGTTGGCTTTGGAAGTAATAGGGTCTGACCTATTTGATAGAAGTATAGAAGAATGGAATTCTCAGCTAGACAAGTACGCAAGAACCCCTCATGAAGATGTCCATGAAATCCTGAAAGTAAGCTATGATAGTTTGCAAGAGAATGAGAAGACAATTTTCCTTGATATTGCTTGTTTCTTTAATAAATTAGAACTGACTTACACCAAGGAAATACTGTGTGCACATGGCTTACACGGAGACATTGGAATTAGAATCTTACTGGAGAAATCTCTCATCAAGATCGATAGTTCAAACTGTGTGAGAATGCACGACTTAATTCAAGACATGGGCAGAGAAATTGTTAGACTGGAATCAACATCTGAGCCTGGCAAGCGTAGTAGGTTGTGGCTTGATGAGGACATTGTTCATGTTTTGGAAGAAAACACGGGAAGTGAGAAAATTGAAGTCATAATGATTCACTCATGCAAATATAAAGAAGTGCAATGGAGTGGAGTGGCATTCGAGAAGATGAAAAACCTGAGAATCCTTATTATTGAAAATGTACGCTTTTCCAGAGGCCCCGAATATCTCCCTAATACTTTGAGAGTATTGGACTGGAGTGGATATCCGTCATCATCTTTACCATCTGATTTTAACCCCAGGAATCTTCTCATACTCAGCCTACCTGAATGCTGCCTTCAATTTTTCAAACCACCAAAGGTGTTTCATTCTTTATGTCTCATGGATTTTGAAGGTTGTAAATTCTTAACACGAGTACCTAATCTATCTGGACTGCCTAACTTGGGAGCGTTGTGTCTTGATAATTGTACAAATCTGATTAGTATTCACGAATCAATTGGGTTTCTTGATAGGCTCAGATTGTTGAGTGCCCAAGGTTGCACTCAGCTTGAAATGTTAGCAACTCGCATCAATATGACTTCTCTTGAGACTCTGGATCTCAGGGGTTGCTCAAGTCTTTGGGAGTTCCCAGAAGTACTGGGACTCATGGAGAATACAAGAGACATTTATTTGGATCAGACTGCCATAAAAGAACTTCCAGTTTCAATTGGAAACCTTATTGGATTGAAACGGCTATACTTGAGGCGTTGTCCACAGCTTAGACAGCTACCAGGCAGCATATCCATGATCCCCAAACTCGAGGTGGTGCTGGCTTACAGGAGCAGAGGATTTCAATTATTTAGAGGGTATGAAATTCAAGAAAAACAGAGGTCCGAAGCGTCTTTGGCCACGATTCTACTCTATTCTGTACGAGATTTTAGCTATCAAAGAACAAAGGACGCTCAGTTCGATCATTGCCTTAATGGGTACTGTATAGGCGAAAGCGAAACAAATTTCATTCAGATATTTCCTCTTCCAGAAACTTCGGTTGGTTGTGCTCGGTTTTCCAGGACTAGCATCGGATGTCTTCCTTTTGGGGACCACCCTACTACCCTCCCATTGTTGAAGAACCAAAAGACAACATTAAGAGCCAGCTGTGCAAGCAGGGAATCATCAGTTTCTTTCTGGTTCTGTGAGAATTTCCCAAAGATAGCCGTATCTGTGATTGGGGGATCAGGCACAGAAACAGAGGACTCAATCTTGGACACTAGGCTGAGAGTGTTTGTCAATGGTTCTGAACAACTTGTTTCGTGGGAGTTGAAATACCTCAGGCCTTATGATCCTCGTAGGGTAATTTCAGACGACAATGGAATCCCAACAATCGAAATAGATTTGTCTGCAATTCATGTCTATGAGAAGAAAGCAGCAGCACTGACAATATGCGGTTCACAAACCCTGATATTTCTCTGTCTCAGGTTGAAACGATGA 2979 0.4236 MASRELPSPSFAGEWTYDVFLSFRGEDTRTNFTGHLYNSLKQKGVQTFIDDVGLQRGEEITPALLEAIRQSRIAVIVFSKNYASSTFCLDELVNILHCVRGEGRLVWPVFYDVDPSDVRHQRGSYGQALAKHDDRFQANKEKVRKWREALCVAANLSGWHFQHGSQPEYEFISGIIEEVSKKINRVPLHIANHPVGLESSVQEVISLLELESDKGINMVGICGIGGVGKTTVARAVYNLIGDQFEGLCFLADIREKAIGVHGLVQLQETLLSQVVAEKNLRLGDVHSGISIIKRRLRRKKVLLILDDIDKLKQLQVLAGRPDWFGSGSRIIVTTRDKHLLSTHGVEKLYEVKGLNFNKSLELLSWNAFKNNMFDPHYMDVSKRAVSYAGGLPLALEVIGSDLFDRSIEEWNSQLDKYARTPHEDVHEILKVSYDSLQENEKTIFLDIACFFNKLELTYTKEILCAHGLHGDIGIRILLEKSLIKIDSSNCVRMHDLIQDMGREIVRLESTSEPGKRSRLWLDEDIVHVLEENTGSEKIEVIMIHSCKYKEVQWSGVAFEKMKNLRILIIENVRFSRGPEYLPNTLRVLDWSGYPSSSLPSDFNPRNLLILSLPECCLQFFKPPKVFHSLCLMDFEGCKFLTRVPNLSGLPNLGALCLDNCTNLISIHESIGFLDRLRLLSAQGCTQLEMLATRINMTSLETLDLRGCSSLWEFPEVLGLMENTRDIYLDQTAIKELPVSIGNLIGLKRLYLRRCPQLRQLPGSISMIPKLEVVLAYRSRGFQLFRGYEIQEKQRSEASLATILLYSVRDFSYQRTKDAQFDHCLNGYCIGESETNFIQIFPLPETSVGCARFSRTSIGCLPFGDHPTTLPLLKNQKTTLRASCASRESSVSFWFCENFPKIAVSVIGGSGTETEDSILDTRLRVFVNGSEQLVSWELKYLRPYDPRRVISDDNGIPTIEIDLSAIHVYEKKAAALTICGSQTLIFLCLRLKR 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4371g00034 992 Gene3D - 353 437 IPR042197 -
Pral4371g00034 992 Gene3D Ribonuclease Inhibitor 536 694 IPR032675 -
Pral4371g00034 992 Gene3D Ribonuclease Inhibitor 695 778 IPR032675 -
Pral4371g00034 992 SUPERFAMILY L domain-like 549 774 - -
Pral4371g00034 992 SMART AAA_5 215 354 IPR003593 GO:0016887
Pral4371g00034 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Pral4371g00034 992 Pfam TIR domain 17 186 IPR000157 GO:0007165
Pral4371g00034 992 Gene3D - 181 347 IPR027417 -
Pral4371g00034 992 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 774 IPR044974 GO:0006952
Pral4371g00034 992 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pral4371g00034 992 SUPERFAMILY "Winged helix" DNA-binding domain 424 530 IPR036390 -
Pral4371g00034 992 PRINTS Disease resistance protein signature 295 309 - -
Pral4371g00034 992 PRINTS Disease resistance protein signature 388 402 - -
Pral4371g00034 992 PRINTS Disease resistance protein signature 218 233 - -
Pral4371g00034 992 PRINTS Disease resistance protein signature 694 710 - -
Pral4371g00034 992 SMART till_3 16 156 IPR000157 GO:0007165
Pral4371g00034 992 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Pral4371g00034 992 Pfam NB-ARC domain 198 437 IPR002182 GO:0043531
Pral4371g00034 992 Gene3D - 13 180 IPR035897 -
Pral4371g00034 992 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4371g00034 Pral-Chr4371 220473 224294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4371g00034 7 773 WRKY Transcription Factor Family AT4G12020 33.544 9.70e-109 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4371g00034 - - ahf:112736348 1053.51