Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4369g00009 | ATGAAGAAAGTCCCATATGTGGATACTGAGAAGCCTGAACAAACTAGCTTCAAGGTTGTATTTGACAAGTTGATGAAGGAACTTCGGGAACCTGTAGACTTTGAACTCCCAGATTGGTTTAATAAGTGGAAGCCAATGTCCTACACCTCTATAAAACGCAATATATATCGCACAAAGAAGGTTAGGAAACGACTTGATGATGATGATGGCATTTTCTGTTCCTGTACTCCCTCCGCTGGCTCTTCTAGTGTATGTGGTAAAGACTGCCTCTGCGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGTAAATGTGGGAGCTCCTGCCTGAACAAACCATTCCAGAATCGACCTCTGAAGAAGATGAAACTGGTCGAGACAGAGAAATGTGGTTCGGGAATTGTGGCGGATGAGGATATTGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGGTGATCAACGATCCATAATTATTTTCATATTTGCAAGTAAATATTTGCTTTGGAATATGAAACATCGAGGGGAGACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTCGCAACTCGTGACATTAAAAAGGGGGAACACCTGACATATGATTACCACAGGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGTGTTCGACCACCCAAGCCCAAAACGGCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGTTATTGGTGAGGGAAGAAACTCTTCTGTCTCTAAGCCCATGTAGGGCAATCCTGATAAGGATTCTTGTGAACAGAAAAAATTGCTATTCCTTTCCCTTCATCAATGCATGA | 966 | 0.4151 | MKKVPYVDTEKPEQTSFKVVFDKLMKELREPVDFELPDWFNKWKPMSYTSIKRNIYRTKKVRKRLDDDDGIFCSCTPSAGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQNRPLKKMKLVETEKCGSGIVADEDIEQGEFVIEYVGEGDQRSIIIFIFASKYLLWNMKHRGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYHRFVQFGADQDCHCGAVTCRRKLGVRPPKPKTASDAALKLVAYQLLVREETLLSLSPCRAILIRILVNRKNCYSFPFINA | 321 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4369g00009 | 321 | ProSiteProfiles | Post-SET domain profile. | 249 | 265 | IPR003616 | - | |
Pral4369g00009 | 321 | FunFam | Histone-lysine N-methyltransferase | 34 | 281 | - | - | |
Pral4369g00009 | 321 | Gene3D | SET domain | 28 | 281 | IPR046341 | - | |
Pral4369g00009 | 321 | SMART | PostSET_3 | 249 | 265 | IPR003616 | - | |
Pral4369g00009 | 321 | SMART | set_7 | 119 | 248 | IPR001214 | GO:0005515 | |
Pral4369g00009 | 321 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 41 | 300 | IPR025787 | - | |
Pral4369g00009 | 321 | ProSiteProfiles | SET domain profile. | 119 | 242 | IPR001214 | GO:0005515 | |
Pral4369g00009 | 321 | SUPERFAMILY | SET domain | 41 | 261 | IPR046341 | - | |
Pral4369g00009 | 321 | CDD | SET_ASHR3-like | 120 | 265 | - | - | |
Pral4369g00009 | 321 | SMART | shorttest3 | 68 | 118 | IPR006560 | GO:0005634|GO:0042054 | |
Pral4369g00009 | 321 | ProSiteProfiles | AWS domain profile. | 68 | 117 | IPR006560 | GO:0005634|GO:0042054 | |
Pral4369g00009 | 321 | PANTHER | SET DOMAIN PROTEINS | 21 | 272 | - | - | |
Pral4369g00009 | 321 | Pfam | SET domain | 130 | 241 | IPR001214 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4369g00009 | Pral-Chr4369 | 20662 | 26070 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4369g00009 | 98 | 261 | C2H2 Transcription Factor Family | AT2G23740 | 35.000 | 6.84e-20 | 89.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Pral4369g00009 | SET | 3.6e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4369g00009 | - | - | gmx:100808183 | 453.366 |