Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4369g00008 ATGAAGAAAGTCCCATATGTGGATACTGAGAAGCCTGAACAAACTAGCTTCAAGGTTGTATTTGACAAGTTGATGAAGGAACTTCGGGAACCTGTAGACTTTGAACTCCCAGATTGGTTTAATAAGTGGAAGCCAATGTCCTACACCTCTATAAAACGCAATATATATCGCACAAAGAAGGTTAGGAAACGACTTGATGATGATGATGGCATTTTCTGTTCCTGTACTCCCTCCGCTGGCTCTTCTAGTGTATGTGGTAAAGACTGCCTCTGCGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGTAAATGTGGGAGCTCCTGCCTGAACAAACCATTCCAGAATCGACCTCTGAAGAAGATGAAACTGGTCGAGACAGAGAAATGTGGTTCGGGAATTGTGGCGGATGAGGATATTGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGGTGATCAACGATCCATAATTATTTTCATATTTGCAAGTAAATATTTGCTTTGGAATATGAAACATCGAGGGGAGACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTCGCAACTCGTGACATTAAAAAGGGGGAACACCTGACATATGATTACCACAGGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGTGTTCGACCACCCAAGCCCAAAACGGCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAAAATGGAGGCTTGCGTGCAGGAAGTTCTCACGTTATTGGCCAACAGAAGTGTTCTCACAATTGCATTGGTCAAGTTGTTAGGATAAATGAGAGGTTTGGGATTATTAGGCGGTTTGATAAATATTCAAAAAAGCACTTGATCATGTTTGAGGATGGCACTGCTGGTTTTCATGACATGTCAGAAGAAGACTGGGAGCTTGTGAGACTGTGA 1074 0.4162 MKKVPYVDTEKPEQTSFKVVFDKLMKELREPVDFELPDWFNKWKPMSYTSIKRNIYRTKKVRKRLDDDDGIFCSCTPSAGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQNRPLKKMKLVETEKCGSGIVADEDIEQGEFVIEYVGEGDQRSIIIFIFASKYLLWNMKHRGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYHRFVQFGADQDCHCGAVTCRRKLGVRPPKPKTASDAALKLVAYQVYQNGGLRAGSSHVIGQQKCSHNCIGQVVRINERFGIIRRFDKYSKKHLIMFEDGTAGFHDMSEEDWELVRL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4369g00008 357 ProSiteProfiles Post-SET domain profile. 249 265 IPR003616 -
Pral4369g00008 357 FunFam Histone-lysine N-methyltransferase 34 281 - -
Pral4369g00008 357 SUPERFAMILY SET domain 41 261 IPR046341 -
Pral4369g00008 357 SMART PostSET_3 249 265 IPR003616 -
Pral4369g00008 357 SMART set_7 119 248 IPR001214 GO:0005515
Pral4369g00008 357 ProSiteProfiles SET domain profile. 119 242 IPR001214 GO:0005515
Pral4369g00008 357 Pfam SET domain 130 241 IPR001214 GO:0005515
Pral4369g00008 357 Gene3D SET domain 29 281 IPR046341 -
Pral4369g00008 357 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 308 IPR025787 -
Pral4369g00008 357 PANTHER SET DOMAIN PROTEINS 22 279 - -
Pral4369g00008 357 SMART shorttest3 68 118 IPR006560 GO:0005634|GO:0042054
Pral4369g00008 357 ProSiteProfiles AWS domain profile. 68 117 IPR006560 GO:0005634|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4369g00008 Pral-Chr4369 20662 27898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4369g00008 98 261 C2H2 Transcription Factor Family AT2G23740 35.000 1.76e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4369g00008 SET 4.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4369g00008 - - gmx:100808183 561.222