Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4369g00007 ATGAAGAAAGTCCCATATGTGGATACTGAGAAGCCTGAACAAACTAGCTTCAAGGTTGTATTTGACAAGTTGATGAAGGAACTTCGGGAACCTGTAGACTTTGAACTCCCAGATTGGTTTAATAAGTGGAAGCCAATGTCCTACACCTCTATAAAACGCAATATATATCGCACAAAGAAGGTTAGGAAACGACTTGATGATGATGATGGCATTTTCTGTTCCTGTACTCCCTCCGCTGGCTCTTCTAGTGTATGTGGTAAAGACTGCCTCTGCGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGTAAATGTGGGAGCTCCTGCCTGAACAAACCATTCCAGAATCGACCTCTGAAGAAGATGAAACTGGTCGAGACAGAGAAATGTGGTTCGGGAATTGTGGCGGATGAGGATATTGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGTCATTGATGACAAAGAATGTGAACATAGGCTTTGGAATATGAAACATCGAGGGGAGACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTCGCAACTCGTGACATTAAAAAGGGGGAACACCTGACATATGATTACCAGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGTGTTCGACCACCCAAGCCCAAAACGGCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAAAATGGAGGCTTGCGTGCAGGAAGTTCTCACGTTATTGGCCAACAGAAGTGTTCTCACAATTGCATTGGTCAAGTTGTTAGGATAAATGAGAGGTTTGGGATTATTAGGCGGTTTGATAAATATTCAAAAAAGCACTTGATCATGTTTGAGGATGGCACTGCTGGTTTTCATGACATGTCAGAAGAAGACTGGGAGCTTGTGAGACTGTGA 1053 0.4207 MKKVPYVDTEKPEQTSFKVVFDKLMKELREPVDFELPDWFNKWKPMSYTSIKRNIYRTKKVRKRLDDDDGIFCSCTPSAGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQNRPLKKMKLVETEKCGSGIVADEDIEQGEFVIEYVGEVIDDKECEHRLWNMKHRGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYQFVQFGADQDCHCGAVTCRRKLGVRPPKPKTASDAALKLVAYQVYQNGGLRAGSSHVIGQQKCSHNCIGQVVRINERFGIIRRFDKYSKKHLIMFEDGTAGFHDMSEEDWELVRL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4369g00007 350 SUPERFAMILY SET domain 14 248 IPR046341 -
Pral4369g00007 350 ProSiteProfiles SET domain profile. 119 236 IPR001214 GO:0005515
Pral4369g00007 350 SMART PostSET_3 242 258 IPR003616 -
Pral4369g00007 350 FunFam Histone-lysine N-methyltransferase 34 274 - -
Pral4369g00007 350 ProSiteProfiles Post-SET domain profile. 242 258 IPR003616 -
Pral4369g00007 350 SMART set_7 119 242 IPR001214 GO:0005515
Pral4369g00007 350 Gene3D SET domain 28 274 IPR046341 -
Pral4369g00007 350 CDD SET_ASHR3-like 120 258 - -
Pral4369g00007 350 SMART shorttest3 68 118 IPR006560 GO:0005634|GO:0042054
Pral4369g00007 350 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 301 IPR025787 -
Pral4369g00007 350 ProSiteProfiles AWS domain profile. 68 117 IPR006560 GO:0005634|GO:0042054
Pral4369g00007 350 PANTHER SET DOMAIN PROTEINS 22 273 - -
Pral4369g00007 350 Pfam SET domain 130 235 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4369g00007 Pral-Chr4369 20662 28804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4369g00007 98 257 C2H2 Transcription Factor Family AT2G23740 36.111 6.76e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4369g00007 SET 9.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4369g00007 - - gmx:100808183 592.808