Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4369g00006 ATGAAGAAAGTCCCATATGTGGATACTGAGAAGCCTGAACAAACTAGCTTCAAGGTTGTATTTGACAAGTTGATGAAGGAACTTCGGGAACCTGTAGACTTTGAACTCCCAGATTGGTTTAATAAGTGGAAGCCAATGTCCTACACCTCTATAAAACGCAATATATATCGCACAAAGAAGGTTAGGAAACGACTTGATGATGATGATGGCATTTTCTGTTCCTGTACTCCCTCCGCTGGCTCTTCTAGTGTATGTGGTAAAGACTGCCTCTGCGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGTAAATGTGGGAGCTCCTGCCTGAACAAACCATTCCAGAATCGACCTCTGAAGAAGATGAAACTGGTCGAGACAGAGAAATGTGGTTCGGGAATTGTGGCGGATGAGGATATTGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGTCATTGATGACAAAGAATGTGAACATAGGCTTTGGAATATGAAACATCGAGGGGAGACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTCGCAACTCGTGACATTAAAAAGGGGGAACACCTGACATATGATTACCACAGGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGTGTTCGACCACCCAAGCCCAAAACGGCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAAAATGGAGGCTTGCGTGCAGGAAGTTCTCACGTTATTGGCCAACAGAAGTGTTCTCACAATTGCATTGGTCAAGTTGTTAGGATAAATGAGAGGTTTGGGATTATTAGGCGGTTTGATAAATATTCAAAAAAGCACTTGATCATGTTTGAGGATGGCACTGCTGGTTTTCATGACATGTCAGAAGAAGACTGGGAGCTTGTGAGACTGTGA 1056 0.4214 MKKVPYVDTEKPEQTSFKVVFDKLMKELREPVDFELPDWFNKWKPMSYTSIKRNIYRTKKVRKRLDDDDGIFCSCTPSAGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQNRPLKKMKLVETEKCGSGIVADEDIEQGEFVIEYVGEVIDDKECEHRLWNMKHRGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYHRFVQFGADQDCHCGAVTCRRKLGVRPPKPKTASDAALKLVAYQVYQNGGLRAGSSHVIGQQKCSHNCIGQVVRINERFGIIRRFDKYSKKHLIMFEDGTAGFHDMSEEDWELVRL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4369g00006 351 CDD SET_ASHR3-like 120 259 - -
Pral4369g00006 351 Pfam SET domain 130 235 IPR001214 GO:0005515
Pral4369g00006 351 Gene3D SET domain 28 275 IPR046341 -
Pral4369g00006 351 ProSiteProfiles SET domain profile. 119 236 IPR001214 GO:0005515
Pral4369g00006 351 ProSiteProfiles Post-SET domain profile. 243 259 IPR003616 -
Pral4369g00006 351 SMART set_7 119 242 IPR001214 GO:0005515
Pral4369g00006 351 PANTHER SET DOMAIN PROTEINS 22 274 - -
Pral4369g00006 351 SMART shorttest3 68 118 IPR006560 GO:0005634|GO:0042054
Pral4369g00006 351 SUPERFAMILY SET domain 14 249 IPR046341 -
Pral4369g00006 351 ProSiteProfiles AWS domain profile. 68 117 IPR006560 GO:0005634|GO:0042054
Pral4369g00006 351 SMART PostSET_3 243 259 IPR003616 -
Pral4369g00006 351 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 302 IPR025787 -
Pral4369g00006 351 FunFam Histone-lysine N-methyltransferase 34 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4369g00006 Pral-Chr4369 20662 28804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4369g00006 98 258 C2H2 Transcription Factor Family AT2G23740 36.111 1.63e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4369g00006 SET 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4369g00006 - - gmx:100808183 586.645