Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4369g00005 ATGAAGAAAGTCCCATATGTGGATACTGAGAAGCCTGAACAAACTAGCTTCAAGGTTGTATTTGACAAGTTGATGAAGGAACTTCGGGAACCTGTAGACTTTGAACTCCCAGATTGGTTTAATAAGTGGAAGCCAATGTCCTACACCTCTATAAAACGCAATATATATCGCACAAAGAAGGTTAGGAAACGACTTGATGATGATGATGGCATTTTCTGTTCCTGTACTCCCTCCGCTGGCTCTTCTAGTGTATGTGGTAAAGACTGCCTCTGCGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGTAAATGTGGGAGCTCCTGCCTGAACAAACCATTCCAGAATCGACCTCTGAAGAAGATGAAACTGGTCGAGACAGAGAAATGTGGTTCGGGAATTGTGGCGGATGAGGATATTGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGCAGTCATTGATGACAAAGAATGTGAACATAGGCTTTGGAATATGAAACATCGAGGGGAGACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTCGCAACTCGTGACATTAAAAAGGGGGAACACCTGACATATGATTACCACAGGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGTGTTCGACCACCCAAGCCCAAAACGGCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAAAATGGAGGCTTGCGTGCAGGAAGTTCTCACGTTATTGGCCAACAGAAGTGTTCTCACAATTGCATTGGTCAAGTTGTTAGGATAAATGAGAGGTTTGGGATTATTAGGCGGTTTGATAAATATTCAAAAAAGCACTTGATCATGTTTGAGGATGGCACTGCTGGTTTTCATGACATGTCAGAAGAAGACTGGGAGCTTGTGAGACTGTGA 1059 0.4221 MKKVPYVDTEKPEQTSFKVVFDKLMKELREPVDFELPDWFNKWKPMSYTSIKRNIYRTKKVRKRLDDDDGIFCSCTPSAGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQNRPLKKMKLVETEKCGSGIVADEDIEQGEFVIEYVGEAVIDDKECEHRLWNMKHRGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYHRFVQFGADQDCHCGAVTCRRKLGVRPPKPKTASDAALKLVAYQVYQNGGLRAGSSHVIGQQKCSHNCIGQVVRINERFGIIRRFDKYSKKHLIMFEDGTAGFHDMSEEDWELVRL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4369g00005 352 ProSiteProfiles SET domain profile. 119 237 IPR001214 GO:0005515
Pral4369g00005 352 FunFam Histone-lysine N-methyltransferase 34 276 - -
Pral4369g00005 352 SMART PostSET_3 244 260 IPR003616 -
Pral4369g00005 352 CDD SET_ASHR3-like 120 260 - -
Pral4369g00005 352 SUPERFAMILY SET domain 14 250 IPR046341 -
Pral4369g00005 352 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 303 IPR025787 -
Pral4369g00005 352 ProSiteProfiles Post-SET domain profile. 244 260 IPR003616 -
Pral4369g00005 352 Pfam SET domain 130 236 IPR001214 GO:0005515
Pral4369g00005 352 SMART shorttest3 68 118 IPR006560 GO:0005634|GO:0042054
Pral4369g00005 352 SMART set_7 119 243 IPR001214 GO:0005515
Pral4369g00005 352 ProSiteProfiles AWS domain profile. 68 117 IPR006560 GO:0005634|GO:0042054
Pral4369g00005 352 PANTHER SET DOMAIN PROTEINS 22 274 - -
Pral4369g00005 352 Gene3D SET domain 29 276 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4369g00005 Pral-Chr4369 20662 28804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4369g00005 98 259 C2H2 Transcription Factor Family AT2G23740 35.912 5.85e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4369g00005 SET 1.4e-20 No_clan