Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4369g00004 ATGAAGAAAGTCCCATATGTGGATACTGAGAAGCCTGAACAAACTAGCTTCAAGGTTGTATTTGACAAGTTGATGAAGGAACTTCGGGAACCTGTAGACTTTGAACTCCCAGATTGGTTTAATAAGTGGAAGCCAATGTCCTACACCTCTATAAAACGCAATATATATCGCACAAAGAAGGTTAGGAAACGACTTGATGATGATGATGGCATTTTCTGTTCCTGTACTCCCTCCGCTGGCTCTTCTAGTGTATGTGGTAAAGACTGCCTCTGCGGGATGCTGTTTTCTACTTGCTCTTCAGGCTGTAAATGTGGGAGCTCCTGCCTGAACAAACCATTCCAGAATCGACCTCTGAAGAAGATGAAACTGGTCGAGACAGAGAAATGTGGTTCGGGAATTGTGGCGGATGAGGATATTGAACAAGGGGAGTTTGTGATAGAATATGTAGGAGAAGGTGATCAACGATCCATAATTATTTTCATATTTGCAAGTAAATATTTGCTTTGGAATATGAAACATCGAGGGGAGACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTCGCAACTCGTGACATTAAAAAGGGGGAACACCTGACATATGATTACCAGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGTGTTCGACCACCCAAGCCCAAAACGGCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAAAATGGAGGCTTGCGTGCAGGAAGTTCTCACGTTATTGGCCAACAGAAGTGTTCTCACAATTGCATTGGTCAAGTTGTTAGGATAAATGAGAGGTTTGGGATTATTAGGCGGTTTGATAAATATTCAAAAAAGCACTTGATCATGTTTGAGGATGGCACTGCTGGTTTTCATGACATGTCAGAAGAAGACTGGGAGCTTGTGAGACTGTGA 1071 0.4155 MKKVPYVDTEKPEQTSFKVVFDKLMKELREPVDFELPDWFNKWKPMSYTSIKRNIYRTKKVRKRLDDDDGIFCSCTPSAGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNKPFQNRPLKKMKLVETEKCGSGIVADEDIEQGEFVIEYVGEGDQRSIIIFIFASKYLLWNMKHRGETNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGEHLTYDYQFVQFGADQDCHCGAVTCRRKLGVRPPKPKTASDAALKLVAYQVYQNGGLRAGSSHVIGQQKCSHNCIGQVVRINERFGIIRRFDKYSKKHLIMFEDGTAGFHDMSEEDWELVRL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4369g00004 356 Pfam SET domain 130 241 IPR001214 GO:0005515
Pral4369g00004 356 CDD SET_ASHR3-like 120 264 - -
Pral4369g00004 356 FunFam Histone-lysine N-methyltransferase 34 280 - -
Pral4369g00004 356 PANTHER SET DOMAIN PROTEINS 22 278 - -
Pral4369g00004 356 ProSiteProfiles Post-SET domain profile. 248 264 IPR003616 -
Pral4369g00004 356 ProSiteProfiles SET domain profile. 119 242 IPR001214 GO:0005515
Pral4369g00004 356 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 307 IPR025787 -
Pral4369g00004 356 SMART PostSET_3 248 264 IPR003616 -
Pral4369g00004 356 SMART shorttest3 68 118 IPR006560 GO:0005634|GO:0042054
Pral4369g00004 356 ProSiteProfiles AWS domain profile. 68 117 IPR006560 GO:0005634|GO:0042054
Pral4369g00004 356 SMART set_7 119 248 IPR001214 GO:0005515
Pral4369g00004 356 Gene3D SET domain 29 280 IPR046341 -
Pral4369g00004 356 SUPERFAMILY SET domain 41 260 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4369g00004 Pral-Chr4369 20662 28804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4369g00004 98 260 C2H2 Transcription Factor Family AT2G23740 35.000 6.77e-20 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4369g00004 SET 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4369g00004 - - gmx:100808183 567.385