Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4367g00026 ATGGGTTTTTCTTTTTCACCACTTACTTTCCTCTTCTCTCTCCTAGTTTTTGCACTCTTGAACTCAAAATGGGTATGTGGGGATACAGAGCTAAGAGCACTTATGGATATCAAAGCTGCTTTGGACCCAAAAGGCCATTATCTATCTTCGTGGACTATTAATGGAAAACTATGTGGTGGTTCGTTCGAAGGAGTGGGTTGTAACGAGAAGGGTCAAGTGGCTAACATTTCGTTGCAGGGAAAAGGTCTCTCAGGGAAGCTCTCGCCTGCCATTGCAGAGCTCAAGCAACTTACAGGACTTTACTTGCATTATAACTCCTTGCAGGGAACTATTCCCAGAGAAATTGCCAACTTGACTAACCTAAGTGACATGTATTTGAATGTGAATAATCTGTCTGGCGAAATCCCTCCTGAGATAGGCAAAATGGAGAACCTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCATACCAACACAACTTGGTTCACTGAAGAAGCTTGTAGTTCTTGCTCTGCAGTCAAATCAATTGGCTGGTGCCATCCCTGCAAGTTTAGGTGATTTGAGAATGCTAATGAGGCTCGACCTAAGCTCTAATCGCCTCTTTGGCTCCCTTCCCTCTACATTAGCCGATGCTCCTTCGCTTCAAGTTCTAGATGTTCGCAACAACACCCTCTCTGGAAACGTACCTCCTGCTCTAAAGAGACTAGATGAAGGATTTTTGTATGAGTACAATCTGGGATTATGTGGATTAGGGTTTTCATCCTTGAAAACCTGCAATGCTTCAGATCACAGTAATCCGGAGAGACCTGATAAACCATATGGAGCAAGTTTTGGTGGTACATCAGCCAAAGATATACCAGAAACTGCAAATGTCCCACTTCCTTGCAATGGAACTCATTGCCAAAATTCATCAAAACCTAAACAATCAGCATCTATCATTGTTGGCATAGTTGTGTTTGCAATTGCAGTGCCAACAATTGGTGTTCTAACTTTCACACAATATCGTAGGCGAAAACAAGAGCTTGGAAACTCAATTGATATCTCGGATAATAGTCTAATCATGAACCAAGCCAAGAGTGCATACCAGAAAAATGGATCTCCTTTGGCCAGCCTTGAGTACTCTAATGGGTGGGACCCTTTGGCTGAAAGCCGGAATTTCATGGGGGACACCCATGATGCGTTCCATAGTTTCAGGTTCAACTTGGAAGAGGTGGAGACTGCAACTCAGTATTTCTCAGACTTGAACTTGTTGAGAAAGAGTATCTTCAGCGCAACATATAAGGGAATGTTAAGAGATGGATCTGTTGTTGCCATTAAAAGAATCAGTAAAACAAGCTGCAAGAGTGATGACTCTGAGTTTTTGAAGGGACTACACGTTTTGACCTCACTGAGGAATGAGAATTTAGTGAGGTTGAGAGGATTTTGTTGCTCAAGGGGGCGAGGCGAGTGCTTCCTGGTCTATGATTTTGTTCATAATGGAAATCTTTCATGCTACCTCGATGTCAATGAAGGCGAAGGACGTGTCCTTGAATGGTCAACTAGAGTTTCTATTGTTAAAGGCATTGCTAAAGGAATAGCATATTTACATGCCTACAAACCAAACAAGCCGGCCCTTGTTCACCAAAACATCTCAGCTGAGAAAGTGCTCATCGATCAGCGATTCAACCCGATGCTTTCAGATTCTGGCCTTCACAATCTTCTTACTGATGACATTGTCTTCTCAGTACTGAAGGCTAGTGCAGCAAAGGGTTATCTAGCTCCAGAATACACAACAACTGGCAGATTCACAGAGAAAAGTGATGTGTATGCTTTTGGAGTACTTCTTTTTCAGATTCTCTCAGGGAAAAGGAAGATCACTAGCTCTATGCGCCTCGCTGCAGAATCCTCCAGACCTCAAGAACTCATTGACCCAAATCTCCATGGCAGATTCATTGAATATGAGGCTGCGAAGCTTGCAAAAATGGCCTTGCTTTGCTCCCATGAGTCTCCTTTTGAGAGGCCAATGATGGAAGCCATCGTTCTAGAACTTGAAAGTTTCAATATTTGTCCCTGA 2061 0.4304 MGFSFSPLTFLFSLLVFALLNSKWVCGDTELRALMDIKAALDPKGHYLSSWTINGKLCGGSFEGVGCNEKGQVANISLQGKGLSGKLSPAIAELKQLTGLYLHYNSLQGTIPREIANLTNLSDMYLNVNNLSGEIPPEIGKMENLQVLQLCYNQLTGSIPTQLGSLKKLVVLALQSNQLAGAIPASLGDLRMLMRLDLSSNRLFGSLPSTLADAPSLQVLDVRNNTLSGNVPPALKRLDEGFLYEYNLGLCGLGFSSLKTCNASDHSNPERPDKPYGASFGGTSAKDIPETANVPLPCNGTHCQNSSKPKQSASIIVGIVVFAIAVPTIGVLTFTQYRRRKQELGNSIDISDNSLIMNQAKSAYQKNGSPLASLEYSNGWDPLAESRNFMGDTHDAFHSFRFNLEEVETATQYFSDLNLLRKSIFSATYKGMLRDGSVVAIKRISKTSCKSDDSEFLKGLHVLTSLRNENLVRLRGFCCSRGRGECFLVYDFVHNGNLSCYLDVNEGEGRVLEWSTRVSIVKGIAKGIAYLHAYKPNKPALVHQNISAEKVLIDQRFNPMLSDSGLHNLLTDDIVFSVLKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILSGKRKITSSMRLAAESSRPQELIDPNLHGRFIEYEAAKLAKMALLCSHESPFERPMMEAIVLELESFNICP 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4367g00026 686 Pfam Protein tyrosine and serine/threonine kinase 425 678 IPR001245 GO:0004672|GO:0006468
Pral4367g00026 686 FunFam Protein NSP-INTERACTING KINASE 2 493 683 - -
Pral4367g00026 686 ProSiteProfiles Protein kinase domain profile. 414 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4367g00026 686 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pral4367g00026 686 Gene3D Ribonuclease Inhibitor 24 271 IPR032675 -
Pral4367g00026 686 Gene3D Transferase(Phosphotransferase) domain 1 493 684 - -
Pral4367g00026 686 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Pral4367g00026 686 Gene3D Phosphorylase Kinase; domain 1 384 492 - -
Pral4367g00026 686 FunFam Leucine-rich repeat receptor-like kinase 29 137 - -
Pral4367g00026 686 SUPERFAMILY Protein kinase-like (PK-like) 398 681 IPR011009 -
Pral4367g00026 686 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 75 680 - -
Pral4367g00026 686 SUPERFAMILY L domain-like 26 237 - -
Pral4367g00026 686 FunFam Protein NSP-INTERACTING KINASE 2 140 262 - -
Pral4367g00026 686 MobiDBLite consensus disorder prediction 262 284 - -
Pral4367g00026 686 FunFam Protein NSP-INTERACTING KINASE 2 385 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4367g00026 Pral-Chr4367 165348 168814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4367g00026 11 527 Miscellaneous Gene Families AT4G22730 54.095 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pral4367g00026 PK_Tyr_Ser-Thr 2.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4367g00026 - - gmx:100789253 1042.34