Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4367g00022 ATGGGATTCTGGGGTATCGAAGTGAAACCTGGGAAACCTTATCCTTATCACGCGGACAATGTGCAGGGGAAGCTTCATGTAACTCAGGCAACCTTAGGCCTTGGCTCATCAATTGAGAAAAGCATTCTCCAATGTTCTACTGGACATAAAAATCCAGTCTTTTTATGCTCATTGCTGCCAAATAATACTGAGTCGTGCCCTTTGAATCTTGAGTTTGATGAAGATGATTTAGTGGCCTTCTCAGTCATTGGTCCACGAAGTATCCATCTCTCTGGTTTCTTTGAAGCTGCTGATGGGGATGAACTTAGGGATGACTATGAGTATGATTCTTTTGGAGAGGGTATTGCCGATACAGAGACAGAGGAGTCTTCTGAATACAACACTGAAGATGAATATGCGGATGGCTTCATTGATGATAGTGATATTGAGTCTTATCCACCTTCACCTGTCCCAAACAGTGGAGTGGTAATTGAGGAAATAGTAGACGATGATAAGCCCGAAAGTGGAGATAATGCTTCCAAGAAGTCAAAGAAAAAGGTTCAAATGCCTAACTCCAAGGATGGCAAAAATTCCCAGCAGCAAATTGTTGTTAGGGGTGATAAGGGTGTCCATGTTTTGGAAAGTGAAGATGAAGATGGTTTTCCAATTTCTACTTCTCTGATGGAAGAAGCAAAAGGAGAAAAGACACATAAGAAAACTGAGAAGGCCAAGAAAAAGAAAGTGAAAGATGATGACTATGCTGCAACACTGAAACGAAAAGTTGAAGGTGCTGACAAAGATGAGCATCTTGAAGGGAAAAAGACAAAGAAAAAGAAGTTGAAAGAACAAGGTAAAGGGGACAGTGCTAAAGTATCTGGTGATAGCATTGAGACTCATGATGCTAGTTCAGATGGTAAGCATCCTGCTGAGGTGAAAATAACACCCAGCCCGGATCATGATTCTCCTGCTGAGGATCAGCGTAAAGGAAATGCATACAATGAAAACATTCTTGATGGGAAGAAAAAGAAGAAGAAGAAGAAGACTAAGGATGAAGGGGGAACTAATGCAAATCAAACTTCCACAGCTACGGGAAATCAGAATATATCCCCCTCTGAGAGAGGAGAGGAGGAAATAGAAGCCAAGCCATCTCAAATAAGAACCTTCCCAAATGGGTTAGTTGTCGAGGAACTATCCATGGGTAAACCAGATGGCAAAAAAGCTACTGCTGGAAAACAGATCAGTGTTAGATACATTGGCAAGCTACAGAAAAATGGGAAAATATTTGACTCAAATATTGGAAGAGCACCCTTTAAATTTCGCCTTGGTATAGGGCAAGTCATAAAGGGTTGGGACGTTGGGGTCAATGGTATGAGAATTGGGGACAAAAGAAGAATCACAATTCCACCATCCATGGGTTATGGAGATAAACGTGCTGGAAGCATACCTCCAAATTCTTGGCTTGTATTTGATGTTGAGTTGATCGATGTTCGCTGA 1473 0.4155 MGFWGIEVKPGKPYPYHADNVQGKLHVTQATLGLGSSIEKSILQCSTGHKNPVFLCSLLPNNTESCPLNLEFDEDDLVAFSVIGPRSIHLSGFFEAADGDELRDDYEYDSFGEGIADTETEESSEYNTEDEYADGFIDDSDIESYPPSPVPNSGVVIEEIVDDDKPESGDNASKKSKKKVQMPNSKDGKNSQQQIVVRGDKGVHVLESEDEDGFPISTSLMEEAKGEKTHKKTEKAKKKKVKDDDYAATLKRKVEGADKDEHLEGKKTKKKKLKEQGKGDSAKVSGDSIETHDASSDGKHPAEVKITPSPDHDSPAEDQRKGNAYNENILDGKKKKKKKKTKDEGGTNANQTSTATGNQNISPSERGEEEIEAKPSQIRTFPNGLVVEELSMGKPDGKKATAGKQISVRYIGKLQKNGKIFDSNIGRAPFKFRLGIGQVIKGWDVGVNGMRIGDKRRITIPPSMGYGDKRAGSIPPNSWLVFDVELIDVR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4367g00022 490 Gene3D Nucleoplasmin core domain 1 100 - -
Pral4367g00022 490 MobiDBLite consensus disorder prediction 161 376 - -
Pral4367g00022 490 MobiDBLite consensus disorder prediction 161 184 - -
Pral4367g00022 490 MobiDBLite consensus disorder prediction 346 364 - -
Pral4367g00022 490 FunFam Peptidyl-prolyl cis-trans isomerase 379 490 - -
Pral4367g00022 490 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Pral4367g00022 490 SUPERFAMILY FKBP-like 375 490 - -
Pral4367g00022 490 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 403 490 IPR001179 GO:0003755
Pral4367g00022 490 Gene3D - 310 490 IPR046357 GO:0003755
Pral4367g00022 490 MobiDBLite consensus disorder prediction 238 320 - -
Pral4367g00022 490 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 270 - -
Pral4367g00022 490 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 398 487 IPR001179 GO:0003755
Pral4367g00022 490 PIRSF FK506-bp_FPR3 46 256 IPR023566 GO:0003755
Pral4367g00022 490 PIRSF FK506-bp_FPR3 1 52 IPR023566 GO:0003755
Pral4367g00022 490 PIRSF FK506-bp_FPR3 243 490 IPR023566 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4367g00022 Pral-Chr4367 120221 125508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4367g00022 388 490 Calmodulin-binding Proteins AT5G48570 43.103 2.28e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4367g00022 K14826 - gmx:100792856 601.282