Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4367g00021 ATGGAGGAAAAGGAGAGTTTTGGTTCTGGGCTTGTGCTGAAGGATAACGATGCCCCGGACAGCTTCCACGTAGCTTCGAGGAATGAAAACTCCGGTCAGTTCACCGGCGGGACCGAAGCAGCGGCTCCGGCTCCTGTAAGTGCTCCAGCAACGGTGACGGGGACGGCGACTCCAGGCACAGATGTTAAGAAGAAGAGAGGGAGGCCAAGGAAGTATGGTCCCGATGGCTCAATGGCCTTGGCGTTGTCTCCCATGCCGATTTCGTCGTCAATTCCGTTGACCGGTGACTTCTCCGGTTGGAAGCGGGGCAGAGGGCGGTCTGTTGAATCTACGAAGAAGTCGTTTAATAAGTATGAGGTCGAAAGCTCAGGACCAGGTAATGGACTCGCATACTCAGTTGGTGCCAATTTTACACCTCATATACTTACAGTTAACGCTGGCGAGGATGTCAACATGAAGGTCATGTCCTTCTCTCAACAGGGATCTCGTGCCATTTGCGTTCTTTCTGCGAATGGCATGATTTCAAATGTAACACTTCGACAACCAACTTCTTCGGGTGGTACTTTAACTTATGAGGGACGATTTGAGATTCTTTCTTTGTCTGGTTCATTTATGCCAACTGAGAATGGGGTAACAAGGAGCAGATCTGGTGGAATGAGTGTGTCTTTGGCAGGTCCAGATGGTCGAGTGGTTGGGGGTGGACTTGCTGGTCTGTTGGTTGCTGCAGGCCCTGTGCAGGTTGTCGTGGGTAGTTTCCTTCCAGGTTACCGGCAGGAACACAAACACAAGAAGCAGAAGACGGAGTATATATCTACTGTCACACCTCCCCATTTTAGTCCTGTCTCTGACCAAGAATTTCATGTTAGTTTTGGAGGAGTAAAGCCTATTCTAACACCAGCTTTTCAAGGAGACAATGCTGCTTGTTTTAGCAATGTTCAAGGCTCCAGGGACTCATCTACCGATGATAGATCGTCCTTTCCTGAGAAGGAGTCCAACACCAGCCTATCAAATGCTGGGATTCCTGCTTAA 1029 0.4956 MEEKESFGSGLVLKDNDAPDSFHVASRNENSGQFTGGTEAAAPAPVSAPATVTGTATPGTDVKKKRGRPRKYGPDGSMALALSPMPISSSIPLTGDFSGWKRGRGRSVESTKKSFNKYEVESSGPGNGLAYSVGANFTPHILTVNAGEDVNMKVMSFSQQGSRAICVLSANGMISNVTLRQPTSSGGTLTYEGRFEILSLSGSFMPTENGVTRSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGYRQEHKHKKQKTEYISTVTPPHFSPVSDQEFHVSFGGVKPILTPAFQGDNAACFSNVQGSRDSSTDDRSSFPEKESNTSLSNAGIPA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4367g00021 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 319 IPR039605 GO:0003680
Pral4367g00021 342 ProSiteProfiles PPC domain profile profile. 134 275 IPR005175 -
Pral4367g00021 342 MobiDBLite consensus disorder prediction 23 37 - -
Pral4367g00021 342 FunFam AT-hook motif nuclear-localized protein 1-like 139 269 - -
Pral4367g00021 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 261 - -
Pral4367g00021 342 MobiDBLite consensus disorder prediction 1 77 - -
Pral4367g00021 342 MobiDBLite consensus disorder prediction 312 342 - -
Pral4367g00021 342 Gene3D - 139 272 - -
Pral4367g00021 342 CDD DUF296 138 252 IPR005175 -
Pral4367g00021 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4367g00021 Pral-Chr4367 115346 119565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4367g00021 40 260 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 63.877 8.95e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4367g00021 - - pcin:129313186 398.667