Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4367g00005 ATGGCGTTTTTCTTTCTCCTCTCTCCATTTGCCTCCTCCATTAGCCAAGAAGGACAAGCATTAATGGAGATTAAAGCCTCCTTCAGCAGCATAGCAGATGTTTTGCTTGACTGGGATGACTTGCACAATGATGATTTCTGTTCATGGCGTGGAGTTTATTGTGATAATTTAACTCTTACTGTGCTTACTCTGAATCTGTCAAGTTTGAATCTGGGTGGCGAGATATCACCTGCCATTGGCGATTTGAGAAACTTGCAATCCATTGATTTGCAGGGAAATAAGCTGACTGGTCAGATTCCAGATGAAATTGGGAACTGCGCTGCACTTATTTATCTGGATTTGTCTGATAATCAGCTATATGGTGATATACCCTTCTCAATATCAAAGCTAAAGCAGCTTGAGTTTTTGAATTTGAAGAATAATCAGTTGAGCGGTCCTATTCCTTCAACCTTAACCCAAATTCCAAACCTGAAGACTCTTGATCTTGCTCGCAATAAGCTCACTGGTGAGATACCAAGACTCCTGTATTGGAATGAAGTCTTGCAATACCTAGGGTTGAGAGGAAACATGTTGAGCGGAACTCTATCCCCAGATATATGTCAGTTGACCGGACTGTGGTATTTTGATGTGAGAGGCAACAACTTGACGGGCACAATACCTGATACCATTGGGAACTGTACAAGTTTTCAAATTCTGGATATATCTTATAACCAGATTACTGGGGAGATCCCATATAATATTGGATTTCTGCAAGTGGCTACTTTGTCACTTCAAGGGAATAGACTAACTGGAAGGATTCCAGAAGTGATCGGTTTGATGCAAGCCCTTGCTATTTTGGACTTGAGTGAGAATGAACTGGTGGGGCCCATCCCTCCTGTACTTGGCAATTTATCTTTCACAGGCAAGCTGTATCTCCATGGAAACAAGCTCACTGGTCCAATACCTCCAGAACTTGGCAATATGTCTAAGCTGAGCTACCTGCAATTGAATGGCAATAAACTAGTTGGCAGAATTCCTGAGGAACTTGGAAAGCTTGAGCATTTGTTTGAACTGAATCTTGCAAACAATTATCTTGAAGGAACCATTCCACATAACATAAGCTCCTGTACTGCCTTGAATAAGTTTAATGTGCATGGTAATCGCTTAAGTGGTTCTATTCCTTTGAGCTTCCGTGGCCTTGGGAGTCTGACTTACTTAAATCTCTCAGACAACAACTTCAAAGGGAATATACCTATCGAGTTGGGTCACATCATAAATCTTGATGTGCTGGATCTATCTTGCAATAATTTTTTTGGGGAGGTTCCAGCGTCTGTTGGTTTTCTGGAACATCTTCTGACACTTAACTTGAGCCATAACCATTTTACTGGTCCCTTGCCTGCTGAGTTCGGGAATCTGAAAAGCATCCAGATTATTGATATGTCTTTCAACAATCTCTCTGGAAGCATCCCTCCTGAAATTGGGCTGCTGCAGAACCTTGTTTCTCTGATTGTAAACAACAATGACTTGCATGGGAAGATTCCTGACCAGTTAACTAACTGCTTCAGTCTCTCCTCTTTGAATGTCTCTTTCAATAACTTATCTGGGACAATTCCTCCTATGAAGAACTTCTCACGATTTTCTTCTGACAGCTTCATTGGAAATCCCTTTCTATGCGGAAATTGGTTGGGATCAATATGCGATCCTTACATGCCAAAATCCAGTGTAACTTTTTCCAGGGCTGCGATTGTGTGCCTCACTCTTGGGATCCTCACATTGTTGGCCATGGTAATAGTTGCAATGTATAGATTGAGCCAATCAATGCAATTGATGAAGAGATCCAGAGGAACTGGGCAAGGCTCCCCTAAACTTGTTGTTCTTCATATGGACATGGCCATGCATACCTATGATGATATAATGAGAAGTACAGAGAATCTAAGTGAGAAGTATATCATAGGATATGGCGCTTCTAGTACTGTGTACAAGTGTGTTTTGAAGAATTCTCGACCGATTGCGATCAAGCGACTATACAACCAGCATCCAAACAACAAAAGAGAGTTTGAAACAGAACTTGAAACCATTGGCAGCATCAGACATAGAAACCTTGTCACCTTGCATGGTTATGCACTAACTCCAAATGGAAACCTCCTTTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGTCCCTCCAAGAAGAAGGTAAAACTTGACTGGGAAACGCGCTTAAGGATTGCTGTGGGAGCTGCTGAGGGACTTGCTTATCTCCACTATGGCTGCAATCCTCGAGTTATTCATAGGGATATCAAGTCTTCAAATATTCTACTGGATGAGAACTTTGAGGCTCATCTCTCTGATTTTGGTATTGCCAAATGTATCTCAACCACAATAACTCATGCATCAACACATGTTCTTGGAACAATAGGCTATATTGATCCTGAGTATGCCCAGACATCTCGCCTGAATGAAAAATCTGATGTATACAGCTTCGGCATAGTTCTACTTGAGCTGCTTACCGGGAAGAAAGCAGTGCACAATGAGTCTAACCTGCATCATTTGATACTGTCCAAGACAGATAACGACACTGTAATGGAGGCTGTGGATCCTGAAGTTTCTGTTACCTGCATAAATCAAGCCCATGTGAAGAAAACCTTTCAGCTTGCACTGCTTTGCACAAAAAGAAATCCATCTGAGAGGCCTACCATGCATGAGGTTGCCAAGGTTTTAGTCTCGCTCCTTCCTGCACCTCCCAATAAGACATTTGCCTCAGCTGCAAAGACTATTGACTACGCACGATTTGTGATCGAAAAGGGGCAACAAGGCCCCAAGAGGGAGCTGATACAACCTCAACAACAGAACAATTCTTGTGATGCTCAATGGTTCATTCGCTTTGGTGATGCTATATCCAAGAACACCCTCTAA 2910 0.4216 MAFFFLLSPFASSISQEGQALMEIKASFSSIADVLLDWDDLHNDDFCSWRGVYCDNLTLTVLTLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLTGQIPDEIGNCAALIYLDLSDNQLYGDIPFSISKLKQLEFLNLKNNQLSGPIPSTLTQIPNLKTLDLARNKLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLWYFDVRGNNLTGTIPDTIGNCTSFQILDISYNQITGEIPYNIGFLQVATLSLQGNRLTGRIPEVIGLMQALAILDLSENELVGPIPPVLGNLSFTGKLYLHGNKLTGPIPPELGNMSKLSYLQLNGNKLVGRIPEELGKLEHLFELNLANNYLEGTIPHNISSCTALNKFNVHGNRLSGSIPLSFRGLGSLTYLNLSDNNFKGNIPIELGHIINLDVLDLSCNNFFGEVPASVGFLEHLLTLNLSHNHFTGPLPAEFGNLKSIQIIDMSFNNLSGSIPPEIGLLQNLVSLIVNNNDLHGKIPDQLTNCFSLSSLNVSFNNLSGTIPPMKNFSRFSSDSFIGNPFLCGNWLGSICDPYMPKSSVTFSRAAIVCLTLGILTLLAMVIVAMYRLSQSMQLMKRSRGTGQGSPKLVVLHMDMAMHTYDDIMRSTENLSEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQHPNNKREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPSKKKVKLDWETRLRIAVGAAEGLAYLHYGCNPRVIHRDIKSSNILLDENFEAHLSDFGIAKCISTTITHASTHVLGTIGYIDPEYAQTSRLNEKSDVYSFGIVLLELLTGKKAVHNESNLHHLILSKTDNDTVMEAVDPEVSVTCINQAHVKKTFQLALLCTKRNPSERPTMHEVAKVLVSLLPAPPNKTFASAAKTIDYARFVIEKGQQGPKRELIQPQQQNNSCDAQWFIRFGDAISKNTL 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4367g00005 969 Gene3D Ribonuclease Inhibitor 14 179 IPR032675 -
Pral4367g00005 969 ProSitePatterns Protein kinases ATP-binding region signature. 644 666 IPR017441 GO:0005524
Pral4367g00005 969 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 179 288 - -
Pral4367g00005 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 760 772 IPR008271 GO:0004672|GO:0006468
Pral4367g00005 969 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 153 905 - -
Pral4367g00005 969 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 289 562 - -
Pral4367g00005 969 SMART LRR_typ_2 82 106 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 489 513 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 441 464 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 273 297 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 154 178 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 321 344 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 202 226 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 130 153 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 393 417 IPR003591 -
Pral4367g00005 969 SMART LRR_typ_2 345 369 IPR003591 -
Pral4367g00005 969 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 714 916 - -
Pral4367g00005 969 Pfam Leucine rich repeat N-terminal domain 15 55 IPR013210 -
Pral4367g00005 969 Gene3D Phosphorylase Kinase; domain 1 599 713 - -
Pral4367g00005 969 SUPERFAMILY RNI-like 87 534 - -
Pral4367g00005 969 Pfam Leucine rich repeat 419 478 IPR001611 GO:0005515
Pral4367g00005 969 Pfam Leucine rich repeat 347 406 IPR001611 GO:0005515
Pral4367g00005 969 Pfam Leucine rich repeat 83 143 IPR001611 GO:0005515
Pral4367g00005 969 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 14 178 - -
Pral4367g00005 969 Pfam Leucine Rich repeat 155 170 IPR001611 GO:0005515
Pral4367g00005 969 Pfam Leucine Rich repeat 225 242 IPR001611 GO:0005515
Pral4367g00005 969 SMART serkin_6 638 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4367g00005 969 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 609 713 - -
Pral4367g00005 969 Gene3D Ribonuclease Inhibitor 254 562 IPR032675 -
Pral4367g00005 969 Pfam Protein kinase domain 641 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4367g00005 969 SUPERFAMILY L domain-like 250 339 - -
Pral4367g00005 969 Gene3D Transferase(Phosphotransferase) domain 1 714 922 - -
Pral4367g00005 969 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Pral4367g00005 969 ProSiteProfiles Protein kinase domain profile. 638 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4367g00005 969 Gene3D Ribonuclease Inhibitor 180 253 IPR032675 -
Pral4367g00005 969 SUPERFAMILY Protein kinase-like (PK-like) 617 905 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4367g00005 Pral-Chr4367 26776 34598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4367g00005 84 969 Receptor kinase-like Gene Family AT5G07180 76.185 0.0 1357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pral4367g00005 Pkinase 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4367g00005 K20718 - gmx:100811653 1620.52