Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4365g00016 ATGGGGAGGTCACCATGTTGTGATAAAGATGGAGTGAAAAAGGGAGCTTGGACTCCTGAAGAAGATGAACTCTTAGTTCAGTACATCAAGAAGCATGGCTGTGGTAGTTGGCGGACACTACCCAAGAATGCAGGTCTCCTTCGATGTGGAAAAAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCAGACATCAAGCGTGGCCCTTTTACAAGTGAAGAAGAAGGTAAAATCATTCAGCTGCATGGCATGCTCGGCAACAGGTGGGCTGCTATAGCATCTCATTTACCTGGGAGAACAGACAATGAAATTAAGAACTACTGGAACACACATCTGAAGAAGCGCTTCCTTCACTCATCAGGTCATTCTCTGGAGGCACAAGAGCCCTCTTTTAAAGGTCCTCATCATCGGAGTGATATGAAGTCTGAATCTTCTTCTGTACGTCATGTAATCCAGTGGGAAAAGGCCAGAGTTGAGGCAGAGAAAAGGCTGTCAATGGAATTGGAATCCTCATGTGTTAATCATTTTTCTAAATCTAGCACACATTCTGATTGCTTTCTTCGACTTTGGCATTCTGAGGTGGGGCAATCGTTTCGCATGATCACAGAAAAGAAAGCGGAAAGCGAAAGCCCTACCTCGCAAGTAAGCAGTGTCTTTGCCAACATGGCTCAAGAACAACTAAGCAGCCTCAATCCAAAGCTTGAAGATGGCACAGCTGGGTCAGACTCAGGTTCTCATGACTTTCTTGATGCCTCTGATTCTGCATTAAAGCTCCTGCTAGATATACCTGGTGACAATGTCGGGTTCTTTGAAGGATTGGAACAGACTGAGAATTTCCAGGGTCCTCTGCATGATAGATATGACTAA 867 0.4521 MGRSPCCDKDGVKKGAWTPEEDELLVQYIKKHGCGSWRTLPKNAGLLRCGKSCRLRWINYLRPDIKRGPFTSEEEGKIIQLHGMLGNRWAAIASHLPGRTDNEIKNYWNTHLKKRFLHSSGHSLEAQEPSFKGPHHRSDMKSESSSVRHVIQWEKARVEAEKRLSMELESSCVNHFSKSSTHSDCFLRLWHSEVGQSFRMITEKKAESESPTSQVSSVFANMAQEQLSSLNPKLEDGTAGSDSGSHDFLDASDSALKLLLDIPGDNVGFFEGLEQTENFQGPLHDRYD 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4365g00016 288 CDD SANT 69 112 IPR001005 -
Pral4365g00016 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral4365g00016 288 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4365g00016 288 CDD SANT 16 61 IPR001005 -
Pral4365g00016 288 Gene3D - 13 66 - -
Pral4365g00016 288 FunFam Myb transcription factor 11 67 - -
Pral4365g00016 288 MobiDBLite consensus disorder prediction 129 146 - -
Pral4365g00016 288 MobiDBLite consensus disorder prediction 123 146 - -
Pral4365g00016 288 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral4365g00016 288 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4365g00016 288 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral4365g00016 288 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4365g00016 288 Gene3D - 69 115 - -
Pral4365g00016 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral4365g00016 288 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 216 - -
Pral4365g00016 288 SMART sant 66 114 IPR001005 -
Pral4365g00016 288 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4365g00016 Pral-Chr4365 66077 68406 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4365g00016 1 271 MYB Transcription Factor Family AT3G61250 54.448 6.13e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4365g00016 Myb_DNA-binding 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4365g00016 K09422 - qsa:O6P43_008227 328.176