Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4365g00014 ATGGGGCGGCAGCCAGCTGATAAGGCAAAACCAAAACACAGGAAAGGGTTATGGTCACCCGAAGAAGACAATAAGCTCAGAAACTATATTCTCAAGCATGGCTATGGCTGCTGGAGCTCTGTTCCCATCAAGGCAGGGTTGCAGAGGAATGGGAAGAGTTGCAGATTGAGGTGGATCAACTATCTAAGGCCAGGGTTGAAGAGAGGGATGTTCAGCAAACAAGAGGAGGAGAAAATCTTGACCCTTCACCACATGCTAGGCAACAAGTGGTCTCAGATAGCTCAACACTTACCAGGAAGGACAGATAATGAGATAAAGAACCACTGGCATTCATATTTGAAAAAGAAAGTGGCCAAGGCAGAGGAAATACAATCTCAAAATAATAAACAAATGCAGTATGCTAGCTCAAGCTCAGATACCTTTGATTCTACTTCATCATCAAGTCAAAAACCAGCGATGCCAATCTCTGATCACTGCTCTTCTTTGCAAAACTATAACTTCATCAAAGAGGCTAATCAGAGCTCCTTGCCAAAGCTTCTTTTTGCTGAGTGGCTTTCACTAGATCAAGCCAACAGTGGGATCCCTGCAAATTCAGGTGATGACCCTTTTGTGTTTGGAATTGGAAGTTTTGATCAGTACTCAGATTTCCACGAAGCTGCAATGCATGGTGTATCAGAAGGAGGAAGCTATGGTGGACAGTTTGATAATGGTCTAACAACCCCAAATGCTGCAGCAGCTTCTGAAGTCTTCAATGCACAGTTCAAGATGGCAAATCAAATGGCAGGAAATGGGGTCATCCATTTTCCAAGTTTCAGCATGAACAATGATGAAATGTACATGTAG 843 0.4342 MGRQPADKAKPKHRKGLWSPEEDNKLRNYILKHGYGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEEKILTLHHMLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKKVAKAEEIQSQNNKQMQYASSSSDTFDSTSSSSQKPAMPISDHCSSLQNYNFIKEANQSSLPKLLFAEWLSLDQANSGIPANSGDDPFVFGIGSFDQYSDFHEAAMHGVSEGGSYGGQFDNGLTTPNAAAASEVFNAQFKMANQMAGNGVIHFPSFSMNNDEMYM 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4365g00014 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Pral4365g00014 280 CDD SANT 71 113 IPR001005 -
Pral4365g00014 280 CDD SANT 18 62 IPR001005 -
Pral4365g00014 280 Gene3D - 69 139 - -
Pral4365g00014 280 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Pral4365g00014 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pral4365g00014 280 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Pral4365g00014 280 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pral4365g00014 280 PANTHER MYB DOMAIN PROTEIN 55 1 174 - -
Pral4365g00014 280 Gene3D - 15 67 - -
Pral4365g00014 280 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pral4365g00014 280 MobiDBLite consensus disorder prediction 124 155 - -
Pral4365g00014 280 FunFam MYB transcription factor 12 68 - -
Pral4365g00014 280 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pral4365g00014 280 SMART sant 67 115 IPR001005 -
Pral4365g00014 280 SMART sant 14 64 IPR001005 -
Pral4365g00014 280 FunFam MYB transcription factor 70 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4365g00014 Pral-Chr4365 59249 61457 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4365g00014 6 186 MYB Transcription Factor Family AT5G52260 53.927 3.46e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4365g00014 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4365g00014 K09422 - qsa:O6P43_008229 343.199