Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4365g00001 ATGTACGTCTCTGGCGCCGTCGTTCCTCACTCAGCTACTTCACCTTCGCCGTTGCCGCCGCCGCCGATGCCTCCTGGTGGCGTCGACTTCGCTATTTTTGTCAAGGCCACAGCCGCCGTATGCGCTGTTATATTCGTCACTGTCTTTTCGGTCTACCTCAATTACTGGACCGCGCTAATGTTCGCCAGCCAGAACCATACGGCCGGTGGCCTTGACGGCGTCAGTTGGCGGTGTTCTTGCTCTCGAGGAATCGACCGGGAAGTCCTGGATACATTCCCGATCCTCGTGTATTCTACCATAAAAAACCACAAGATCGGAAAAGGAGAGCTCGAATGCGCAGTGTGCTTGAGCGAGTTCGAAGACCACGAGACTCTCCGGTTGATACCAAACTGCAACCACGTGTTTCACCCGGAGTGTATCGACGCCTGGTTAGCTTCTCATGTGACTGTCCCCTTTGTCGAGCAAATCTGA 471 0.5456 MYVSGAVVPHSATSPSPLPPPPMPPGGVDFAIFVKATAAVCAVIFVTVFSVYLNYWTALMFASQNHTAGGLDGVSWRCSCSRGIDREVLDTFPILVYSTIKNHKIGKGELECAVCLSEFEDHETLRLIPNCNHVFHPECIDAWLASHVTVPFVEQI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4365g00001 156 Pfam RING-like zinc finger 111 140 IPR001841 -
Pral4365g00001 156 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Pral4365g00001 156 MobiDBLite consensus disorder prediction 1 20 - -
Pral4365g00001 156 FunFam E3 ubiquitin-protein ligase ATL6 74 155 - -
Pral4365g00001 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 156 IPR013083 -
Pral4365g00001 156 PANTHER RING FINGER DOMAIN-CONTAINING 28 151 - -
Pral4365g00001 156 SUPERFAMILY RING/U-box 103 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4365g00001 Pral-Chr4365 2355 2825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4365g00001 1 151 Rapid Response to Elicitors AT3G05200 43.046 1.22e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4365g00001 K10664 - cit:102623318 132.88