Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4364g00019 ATGGCTTTTCCTTTCAATCTTCTTCTTCATTGCCTTTTCGTGTTCCACCTCTGCTGTTTTCTTGCTTGTGCTTTCACGCACTACACTGGTGAAAACCCTGAGAAAAATCACCTCCTTTCTTTCAAGACCAGTCTCCATAACCCCAGGCTTCTTGCTTCATGGAACTCTTCAACCCCACACTGCAACTGGGTTGGCGTTGCTTGTGAGCTCGACCGAGTTACCTCACTTTCTCTTCCGACTCTTCACCTCGAAGGCCCACTCTCTTCGTCCCTCTTCTCCCTCACCGGCCTTACCGTCCTTAACTTATTCTCCAACGCACTCTCTGGCGGTATTCCTCCACGGATAGCTAATCTGAGAAACCTGAGGGAGCTCAATCTTAGTTATAATCAGTTTTCTGGGGAAATTCCGGACGAGCTCAGCAGTTTGACTCAGCTTACAACTCTCGCACTCAGCTCCAACTCATTTACCGGAAAAATCCCGCCGGAGCTGGGGTCCCTGTCGCAGCTCCGTGTCCTCGACCTTTCTGGTAATGACCTCACCGGAACCGTTCCAGAAAGCATCGGAAACCTGTGCCATCTTCAGTTCCTTGATCTCAGCAACAATCTTCTCTCAGGTTCTCTACCCTTGACTCTTTTCACGGGAACTCTGTCTTTGATTTCCGTTGACGTTTCAAACAATTCTTTTTCTGGTTCTCTACCACCAGAAATCCGTAACTTGAGGAATATCACTGCTCTTTACATTGCCTCTAATAAATTTACGGGTAGATTGCCTCCTGAGTTTGGGGAGCTTTCGCGGCTTCAAGTGCTTTATGCGCCTTCTAGTTCTATAGAAGGTCCACTGCCTGAAGAAATGTCGAAACTGAAGTCATTGTCTAATCTTGACCTTTCTTACAACCCCTTGAGGTGTTCGATACCGAAGTTTATTGGGAAGCTTCAGAATTTGAAATTGCTCGACCTTTCTTTCGCTCAGCTTACTGGCTCCATACCGTCTGAGCTTGGAAGTTGTAGAAACTTGAGTTCTGTGATGCTTTCTTTCAACTCGCTTTCTGGGTCCTTGCCAGAGGAGCTTTCCGAGCTTCCCATGGTGTCATTCATAGCTGAAAGGAATCAGTTTCATGGACTCTTGCCTGCTTGGCTTGGAAAGTGGAATCAGATTAGTACTGTTTTGCTTTCGCAGAATAGATTTTCTGGTAAAATTCCTCCTGAGCTTGGGAATTGCTCTTCATTGGAGCACCTCAGTTTGAGAAGCAACTTGCTGACAGGTGCCATACCTCAGGAGCTATGTAATGCTGCTTCACTTTCGGAGATTGACTTTGATGATAACTTCCTTACGGGCACAATTGAGAAAGCATTTGTTAGGTGTAAGAACCTTATCCAATTACAACTGATGAAAAATCAGATCACTGGTTCTATCCCTCAGTACCTTTCAGAGCTTCCTTTGATGGTGCTTGATCTTGACTCAAACAATTTCAGTGGAAGCATACCTTCAAGTCTGTGGAATTCATCAACTCTAATGGAGTTTTCTGCAGCAAATAACCTTCTGCAGGGCTCTCTTCCTGGGGAGATTGGGAACGCAGTTCTTCTAGAGAGGCTTGTCCTTAATAACAATCAACTGACGGGTACTATACCCAAGGAAATTGGAAATCTTACGGGTCTGTCTGTTCTTAATTTGAATGGAAATGTTCTTGAAGGGAATATTCCGTTAGAGCTAGGAGATTGCATTTCATTGACAACCTTAGACCTTGGAAATAACCGACTGAATGGATCCATTCCAGATAAACTAGTGGAACTGAGCCAATTACAATGTCTGGTTCTGTCCCATAATAATCTTTCTGGGTCTATTCCTGCAAGACGATCTTCATATTTTAGCAGAGTTGCCATCCCTGATTTGAGCTTTGTTCAACACCTTGGAGTATTTGATCTGTCCCATAACAAACTGTCTGGGATTATACCTGATGAACTGGGGAGCTGTATGGTCATTGTGGATCTTTTGCTCAGCAACAACATGCTTTCTGGGAGTATCCCAAGCTCGCTCTCTCGCCTGACAAATCTTACAACCCTAGATTTGTCTGGTAACTTCTTGTCAGGTTCCATTCCACCAGAACTTGGAGATTCCCTCAAGCTACAAGTATATCTGGGACATAATCAACTTAATGGAACCATTCCCGAAAGTCTTGGGAAAATGGACAGTTTGGTGAAGCTGAATTTAACAGGAAATAAGTTGTCCGGTCCAATTCCAATTAGCTGCGGGAACATGAAAGAGCTGACTCACTTAGATTTGAGCTCTAATGAGCTTAGTGGCCAGCTTCCATCCTCTCTATCGGGCCTTCAAAGCCTTGTTGGTCTTTATGTGCAGCAGAACAAGCTTTCTGGCCAAATAGGGGTGCTCTTCTCTAATACTATGACATGGAGGATTGAGACAATGAATTTGAGCGTTAATTGCTTCACTGGGGATTTGCCAAGTTATTTGGGAAACCTTTCTTTCTTGACAAATTTGGATGTTCATGGAAATATGTTCATGGCAGAGATTCCATCGGAACTTGGGAATCTGGTGCAGCTGGAGTACCTCGATGTTTCTGGGAACAGGTTATATGGAAAGATTCCTGAGAAAATTTGCAGCCTAAGTAATCTGGACTACCTTGATTTGTCTCAAAACAGATTGGAAGGGCCTATACCCAGAAGCGGTATTTGCCAGAACCTATCAAGAGTTAAAATTTCAGGAAACAAAAATCTCTGTGGGCGGATTTTGGGCGTCAATTGCCCAATCAAAGGCATTGGTAGATTTTCATTGTCTAATGCCTGGCAACTTGCTGGGATTGCCATTACAATCACACTGATGACTCTGAGCGTTGCATTTGTTCTGCATAGATGGATTGTTAGGAGGCAAAATGATCCAGAAGACCTTGAGGAACACAAGCTAAACAACTACGTGGATCAAAATCTTTATTTCTTGAGCAGTAGCAGATCGAAGGAACCTCTGAGTATAAATGTTGCAATGTTTGAGCAGCCTCTTCTGAAACTAACTTTGGAGGATATCCTTGAAGCTACTGGTAACTTCAGCAAGACTAACATAATTGGAGATGGAGGTTTTGGGACTGTATACAAGGCTACTCTACCCAATGACAAAACAGTTGCAGTAAAGAAGCTGAGCGAAGCTAAAACGCAGGGCCATCGTGAATTTATGGCTGAAATGGAAACTTTAGGCAAGGTGAAGCATCAGAATCTTGTTCCACTTCTTGGCTATTGCTCCTTGGGTGAAGAGAAACTCCTTGTTTATGAATACATGGTGAATGGAAGCTTAGATCTTTGGTTGAGAAACAGGACTGGCGGAGCCCTTGAAGTGCTTGACTGGAAAAAAAGGTACAAAATTGCAACTGGTGCAGCCAGAGGGTTAGCTTTCCTTCATCACGGGTTCATCCCCCACATCATTCACAGAGACATTAAAGCTAGCAACATATTGCTTAATGAAGATTTTGAGCCTAAAGTTGCAGACTTTGGACTTGCTAGGCTTATCAGTGCCTGTGAGTCACACATCACCACTGACATTGCTGGAACATTTGGGTATATTCCACCTGAGTATGGACAGAGTGGTAGGTCCACAACAAGAGGAGATGTCTACAGTTTTGGGGTCATTATGCTTGAGCTGGTGACTGGAAAAGAACCAACAGGGCCTGATTTCAAAGACATTGAAGGTGGGAATCTGGTGGGGTGGGTTTTTCTGAAGATCAAGAAGGGACAGGCTGCTGATGTTCTTGATCCAAAGGTTCTGGATGCCGATTCGAAGCAGATGATGCTTCGGATGCTGCAGATTGCTTGTGTGTGCCTCTCTGACAATCCTGCAAACAGGCCCACCATGCTTCAGGTGTTCAAGCTTTTGAAGGGTATCAAAGGAGAGTAG 3897 0.4421 MAFPFNLLLHCLFVFHLCCFLACAFTHYTGENPEKNHLLSFKTSLHNPRLLASWNSSTPHCNWVGVACELDRVTSLSLPTLHLEGPLSSSLFSLTGLTVLNLFSNALSGGIPPRIANLRNLRELNLSYNQFSGEIPDELSSLTQLTTLALSSNSFTGKIPPELGSLSQLRVLDLSGNDLTGTVPESIGNLCHLQFLDLSNNLLSGSLPLTLFTGTLSLISVDVSNNSFSGSLPPEIRNLRNITALYIASNKFTGRLPPEFGELSRLQVLYAPSSSIEGPLPEEMSKLKSLSNLDLSYNPLRCSIPKFIGKLQNLKLLDLSFAQLTGSIPSELGSCRNLSSVMLSFNSLSGSLPEELSELPMVSFIAERNQFHGLLPAWLGKWNQISTVLLSQNRFSGKIPPELGNCSSLEHLSLRSNLLTGAIPQELCNAASLSEIDFDDNFLTGTIEKAFVRCKNLIQLQLMKNQITGSIPQYLSELPLMVLDLDSNNFSGSIPSSLWNSSTLMEFSAANNLLQGSLPGEIGNAVLLERLVLNNNQLTGTIPKEIGNLTGLSVLNLNGNVLEGNIPLELGDCISLTTLDLGNNRLNGSIPDKLVELSQLQCLVLSHNNLSGSIPARRSSYFSRVAIPDLSFVQHLGVFDLSHNKLSGIIPDELGSCMVIVDLLLSNNMLSGSIPSSLSRLTNLTTLDLSGNFLSGSIPPELGDSLKLQGXYLGHNQLNGTIPESLGKMDSLVKLNLTGNKLSGPIPISCGNMKELTHLDLSSNELSGQLPSSLSGLQSLVGLYVQQNKLSGQIGVLFSNTMTWRIETMNLSVNCFTGDLPSYLGNLSFLTNLDVHGNMFMAEIPSELGNLVQLEYLDVSGNRLYGKIPEKICSLSNLDYLDLSQNRLEGPIPRSGICQNLSRVKISGNKNLCGRILGVNCPIKGIGRFSLSNAWQLAGIAITITLMTLSVAFVLHRWIVRRQNDPEDLEEHKLNNYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLEDILEATGNFSKTNIIGDGGFGTVYKATLPNDKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVPLLGYCSLGEEKLLVYEYMVNGSLDLWLRNRTGGALEVLDWKKRYKIATGAARGLAFLHHGFIPHIIHRDIKASNILLNEDFEPKVADFGLARLISACESHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVIMLELVTGKEPTGPDFKDIEGGNLVGWVFLKIKKGQAADVLDPKVLDADSKQMMLRMLQIACVCLSDNPANRPTMLQVFKLLKGIKGE 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4364g00019 1299 FunFam Leucine-rich repeat receptor protein kinase EMS1 363 622 - -
Pral4364g00019 1299 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Pral4364g00019 1299 Gene3D Ribonuclease Inhibitor 33 139 IPR032675 -
Pral4364g00019 1299 SUPERFAMILY Protein kinase-like (PK-like) 1001 1293 IPR011009 -
Pral4364g00019 1299 CDD STKc_IRAK 1026 1296 - -
Pral4364g00019 1299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1143 1155 IPR008271 GO:0004672|GO:0006468
Pral4364g00019 1299 Gene3D Ribonuclease Inhibitor 140 215 IPR032675 -
Pral4364g00019 1299 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Pral4364g00019 1299 SMART LRR_typ_2 875 900 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 287 309 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 166 189 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 753 777 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 118 142 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 549 573 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 597 619 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 94 117 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 190 214 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 633 657 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 827 851 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 681 705 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 406 430 IPR003591 -
Pral4364g00019 1299 SMART LRR_typ_2 311 335 IPR003591 -
Pral4364g00019 1299 FunFam leucine-rich repeat receptor protein kinase EMS1 215 362 - -
Pral4364g00019 1299 SUPERFAMILY L domain-like 47 362 - -
Pral4364g00019 1299 SMART serkin_6 1020 1293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4364g00019 1299 SUPERFAMILY L domain-like 367 617 - -
Pral4364g00019 1299 Gene3D Ribonuclease Inhibitor 622 923 IPR032675 -
Pral4364g00019 1299 Gene3D Ribonuclease Inhibitor 364 621 IPR032675 -
Pral4364g00019 1299 Gene3D Ribonuclease Inhibitor 216 363 IPR032675 -
Pral4364g00019 1299 FunFam serine/threonine-protein kinase BRI1-like 2 981 1095 - -
Pral4364g00019 1299 FunFam Leucine-rich repeat receptor-like kinase 33 143 - -
Pral4364g00019 1299 Gene3D Transferase(Phosphotransferase) domain 1 1096 1299 - -
Pral4364g00019 1299 ProSitePatterns Protein kinases ATP-binding region signature. 1026 1049 IPR017441 GO:0005524
Pral4364g00019 1299 SUPERFAMILY L domain-like 661 914 - -
Pral4364g00019 1299 Pfam Protein tyrosine and serine/threonine kinase 1023 1292 IPR001245 GO:0004672|GO:0006468
Pral4364g00019 1299 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 629 924 - -
Pral4364g00019 1299 ProSiteProfiles Leucine-rich repeat profile. 120 143 IPR001611 GO:0005515
Pral4364g00019 1299 Pfam Leucine Rich Repeat 120 142 IPR001611 GO:0005515
Pral4364g00019 1299 Pfam Leucine Rich Repeat 756 777 IPR001611 GO:0005515
Pral4364g00019 1299 Pfam Leucine Rich Repeat 683 702 IPR001611 GO:0005515
Pral4364g00019 1299 SMART LRR_sd22_2 681 696 - -
Pral4364g00019 1299 SMART LRR_sd22_2 851 877 - -
Pral4364g00019 1299 SMART LRR_sd22_2 753 779 - -
Pral4364g00019 1299 SMART LRR_sd22_2 633 654 - -
Pral4364g00019 1299 SMART LRR_sd22_2 287 316 - -
Pral4364g00019 1299 SMART LRR_sd22_2 166 192 - -
Pral4364g00019 1299 Gene3D Phosphorylase Kinase; domain 1 983 1095 - -
Pral4364g00019 1299 FunFam serine/threonine-protein kinase BRI1-like 2 1096 1299 - -
Pral4364g00019 1299 FunFam LRR receptor-like serine/threonine-protein kinase 144 214 - -
Pral4364g00019 1299 ProSiteProfiles Protein kinase domain profile. 1020 1299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4364g00019 1299 PRINTS Leucine-rich repeat signature 756 769 - -
Pral4364g00019 1299 PRINTS Leucine-rich repeat signature 875 888 - -
Pral4364g00019 1299 PANTHER RECEPTOR-LIKE PROTEIN 55 808 1296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4364g00019 Pral-Chr4364 91226 95404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4364g00019 73 426 Receptor kinase-like Gene Family AT5G07280 35.519 1.90e-49 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pral4364g00019 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4364g00019 - - gmx:100780446 1886.31