Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4364g00006 ATGGGTTTCCTTCGGCGAATTTTCGGCGGCAAAAAGCCGGCCTCTCCATCCGAAGGCTCCCACAAGTCCGGCTCTGAACCGGTCAAGAGTAAACGGAGATGGAGATTCATCAAACGCAGCAAAGACAAATCCCAAAGTGCTACTTCTGATCTCAATAACACCGACCTTTCCACTTCTTCGCTGCCATACGGTGATTCCTTGAACGCTAATAAACATGCCATTGCAGTGGCTGCGGCGACGGCGGCCGTGGCGGAGGCCGCTCTTGCCGCCGCTCATGCAGCGGCGGAGGTGGTTAGACTCACGAATGGCGGTGGCGGTCCTAGCACAAGCCAGCACCGGTGGCCGGAAGACGTCGCCGCCGTTAAGATACAGTCGGCGTTTCGTGGTTACTTGGCAAAGAGAGCTCTGAGAGCACTAAAAGCATTGGTGAAGTTGCAAGCGTTGGTAAGAGGTCACATCGTAAGAAAGCAAACAGCAGATATGCTGAGGCGCATGCAAACTTTGGTGAGGCTGCAGTCCCGTGCACGTGCAGGTCGCGTGCAGTTGTCCCATATTCTCCATTCTGCCAAGTCTCCACTCTCTCATCACCCTGTTTCTGAACATTATGGAACCTCACTTAGAGCCAATAGTACTAAATTTGAAGGATCTCCTCTTCTGAAGAGATGCAGTTCCAATGCAAATTTCAGGGACATTGGCTCGGGGAGATCAAGGTTTGTATCGCAATGGTACGACAATTGGATGGAAGAAAATGTGTGGAACCATCCCAGAGGAGATGATGAGAAGAGTGATAAAATTCTCGAAGTTGATACTTGGAAGCCCCGCTTGAACTCCCAGAACGAGAATCCTTTGGCATATGAGTCTCCGTCAAAGCGTTCAACAAGCAGTGTAAACCAAGGTCTCTTCAGTTCCCTCAAGTTTCATCAGAAGAGAAAAGAAGAGAAAGCTTCAAGAACAGCAGAGATGAACAGCAAAGAACTCTCAGCCCATTCATATCAGAACAGTCCAGAGTCATTTTCTGCTTCAAGAAGAAGAACGGGTCCTTTCACCCCCACAAGGAGTGAGTGTGGCTACTTTGGTCACCCAAACTATATGGCCAACACCGAGTCATCTCGAGCCAAGTCTAGATCAGTGAGTGCGCCGAGGCAAAGGCTTTGGGATTCTGGAAATAATTCTGATAGGCTTGCTGATTTCAAAAGCCAATGTTCTACATCTTCAAGCCGCTTCAACAGAGTCTTGAGTAGCCATCTAAGGTGA 1254 0.4944 MGFLRRIFGGKKPASPSEGSHKSGSEPVKSKRRWRFIKRSKDKSQSATSDLNNTDLSTSSLPYGDSLNANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGGGGPSTSQHRWPEDVAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARAGRVQLSHILHSAKSPLSHHPVSEHYGTSLRANSTKFEGSPLLKRCSSNANFRDIGSGRSRFVSQWYDNWMEENVWNHPRGDDEKSDKILEVDTWKPRLNSQNENPLAYESPSKRSTSSVNQGLFSSLKFHQKRKEEKASRTAEMNSKELSAHSYQNSPESFSASRRRTGPFTPTRSECGYFGHPNYMANTESSRAKSRSVSAPRQRLWDSGNNSDRLADFKSQCSTSSSRFNRVLSSHLR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4364g00006 417 MobiDBLite consensus disorder prediction 272 304 - -
Pral4364g00006 417 Pfam Protein of unknown function (DUF4005) 331 406 IPR025064 -
Pral4364g00006 417 MobiDBLite consensus disorder prediction 305 320 - -
Pral4364g00006 417 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Pral4364g00006 417 MobiDBLite consensus disorder prediction 366 391 - -
Pral4364g00006 417 MobiDBLite consensus disorder prediction 321 348 - -
Pral4364g00006 417 SMART iq_5 138 159 IPR000048 GO:0005515
Pral4364g00006 417 SMART iq_5 115 137 IPR000048 GO:0005515
Pral4364g00006 417 PANTHER IQ-DOMAIN 5-RELATED 28 398 - -
Pral4364g00006 417 Gene3D - 116 169 - -
Pral4364g00006 417 MobiDBLite consensus disorder prediction 270 354 - -
Pral4364g00006 417 ProSiteProfiles IQ motif profile. 140 167 IPR000048 GO:0005515
Pral4364g00006 417 MobiDBLite consensus disorder prediction 1 55 - -
Pral4364g00006 417 Pfam IQ calmodulin-binding motif 140 157 IPR000048 GO:0005515
Pral4364g00006 417 Pfam IQ calmodulin-binding motif 119 137 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4364g00006 Pral-Chr4364 31468 34803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4364g00006 1 386 IQD Protein Family AT5G07240 45.673 4.14e-60 200