Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4361g00020 ATGGCTGCGTCTCATGAAGTTGCTGACTGCGAGAGGCTCGACGTCACTGTCTTGCTCGTGGATGATGATGCCACCTCTCTCTCCGTCAACGCTGGTTTTCTCAGATCATGGGAATACAAAGTTGCAACTGCTACAAGTGGTCATGAAGCTTTGAAGACTCTGAAGGAATTCAGAGGCTTCTTCGACCTCGTCATCGCCGAACTTAACATGCGAGGAATGAATGGACTGGAACTCCAAAAACGTGTCAAAAGCGAATTCCATCTTCCAGTCATCATTATGTCTGGAGATGGGAGGAGGAGAGTGATGTCGAGAAGCCTCGAGAACGGAGCAGCGTATTGCTTAGTGAAACCAGTAGGAAGAGAGGACTTGAGAGATGTGTGGCAGCATGCTGTGGCTGGGAGGAGAGAGAAACTGACGGTTGAGAATGACAGAATAGTAGCCGTGAGCGAAGAAGAAGGAGACTCATCATCATCATCACCACCTGAAAAACAAAGGAAGAAGTATTGCAAGAGAAAACGTAGTGATGTGATTGATAATGAAGAACTCATATACTGTGGTCAAAAGAGGTCCAAGATTTTCTGGACTACTAATCTTCACAATCGCTTCTTGTTGGCCTTAAGGCACATTGGCATGGACAAGGCTGTTCCAACGAAGATCCTCGAGATCATGAACGTGCCAGGCTTGACCAGAGAAAACGTTGCCAGTCATTTGCAGGTTTGGTTCTTAAGTAAAAAAATAAGTATTCTCTTCAACAGTGCATTTTTTGCCTTCTTCTAA 777 0.4543 MAASHEVADCERLDVTVLLVDDDATSLSVNAGFLRSWEYKVATATSGHEALKTLKEFRGFFDLVIAELNMRGMNGLELQKRVKSEFHLPVIIMSGDGRRRVMSRSLENGAAYCLVKPVGREDLRDVWQHAVAGRREKLTVENDRIVAVSEEEGDSSSSSPPEKQRKKYCKRKRSDVIDNEELIYCGQKRSKIFWTTNLHNRFLLALRHIGMDKAVPTKILEIMNVPGLTRENVASHLQVWFLSKKISILFNSAFFAFF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4361g00020 258 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 235 IPR045279 GO:0009736
Pral4361g00020 258 FunFam Two-component response regulator 185 247 - -
Pral4361g00020 258 MobiDBLite consensus disorder prediction 149 168 - -
Pral4361g00020 258 Pfam Response regulator receiver domain 17 125 IPR001789 GO:0000160
Pral4361g00020 258 ProSiteProfiles Response regulatory domain profile. 16 131 IPR001789 GO:0000160
Pral4361g00020 258 SUPERFAMILY CheY-like 15 137 IPR011006 -
Pral4361g00020 258 Gene3D - 15 182 - -
Pral4361g00020 258 SUPERFAMILY Homeodomain-like 187 244 IPR009057 -
Pral4361g00020 258 Gene3D - 186 246 - -
Pral4361g00020 258 NCBIfam myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Pral4361g00020 258 SMART REC_2 15 127 IPR001789 GO:0000160
Pral4361g00020 258 CDD REC_typeB_ARR-like 17 131 - -
Pral4361g00020 258 MobiDBLite consensus disorder prediction 149 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4361g00020 Pral-Chr4361 135832 138087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4361g00020 6 247 Response Regulator Gene Family AT4G31920 36.214 4.50e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4361g00020 Response_reg 2.7e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4361g00020 - K14491 pcin:129292440 346.665