Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4361g00016 ATGGATAGCAACCCTCCTCCTGCGAGCTTGCCTCAACAAGAACAATCTTCTGCTTCTTCTCCTTCTGCTTTGCAAGTGCCTTCGTCTCACGAGTCGTCTTCGTCTCCGAGGACGCTGAGATCACCGGGTGGATCGTCGTCGGGTCAGCACACCAGCAGGAGGCACGCCACGTTCCGGGGAATCCGGAGCCGAAGTGGAAAATGGGTGTCCGAGATACGGGAGCCTCGTAAAACCACGCGCATTTGGCTGGGCACGTATCCGACTCCGGAGATGGCTGCCGCCGCGTATGATGTCGCCGCACTTGCATTGAAAGGCCCTGACACCACCCTCAACTTCCCCAATTTGATTCTCTCCTACCCGATCCCGGCGTCATTGTCTGCGACGGATATTCGGGCGGCAGCGTCGGCAGCTGCAGAGGCCAGGCTGGTCAGGTCTGCGGAAACCGTCGGACAAAGCGCTGGAGGAGGAGGAGGAGGAGGAGGAGGCCAAGCCGAGGGCGGGAACAGGCCCGGCGGAGAAGTGATGGAGAAAAACGAGGAATTTATCGATGAGGACGAGCTATTGAATATGCCTAGTTTGCTGGATGATATGGCGAGGGGAATGCAGGTGAGTCCGCCGAGGATGAAGTCACCGTACGCTTCCGATGATTCGCCGAGGAATTCAGATCATGGAGATAGCCTCTGGAGTTTTTGA 693 0.5758 MDSNPPPASLPQQEQSSASSPSALQVPSSHESSSSPRTLRSPGGSSSGQHTSRRHATFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTTLNFPNLILSYPIPASLSATDIRAAASAAAEARLVRSAETVGQSAGGGGGGGGGQAEGGNRPGGEVMEKNEEFIDEDELLNMPSLLDDMARGMQVSPPRMKSPYASDDSPRNSDHGDSLWSF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4361g00016 230 MobiDBLite consensus disorder prediction 197 230 - -
Pral4361g00016 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 31 201 - -
Pral4361g00016 230 SMART rav1_2 57 119 IPR001471 GO:0003700|GO:0006355
Pral4361g00016 230 FunFam Ethylene-responsive transcription factor 2 56 114 - -
Pral4361g00016 230 MobiDBLite consensus disorder prediction 1 54 - -
Pral4361g00016 230 ProSiteProfiles AP2/ERF domain profile. 57 113 IPR001471 GO:0003700|GO:0006355
Pral4361g00016 230 MobiDBLite consensus disorder prediction 148 176 - -
Pral4361g00016 230 CDD AP2 58 115 IPR001471 GO:0003700|GO:0006355
Pral4361g00016 230 Gene3D AP2/ERF domain 57 114 IPR036955 GO:0003700|GO:0006355
Pral4361g00016 230 SUPERFAMILY DNA-binding domain 58 114 IPR016177 GO:0003677
Pral4361g00016 230 MobiDBLite consensus disorder prediction 1 67 - -
Pral4361g00016 230 Pfam AP2 domain 59 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4361g00016 Pral-Chr4361 117661 118667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4361g00016 54 230 AP2-EREBP Transcription Factor Family AT5G52020 58.011 5.12e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4361g00016 AP2 2.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4361g00016 - - pcin:129293795 334.724