Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4361g00006 ATGGAAGGGAAACAGACCCAGAAAATCGAACACAAGCATGAGGATTTTAATGACGAAGAAGAAAGCCACAGTGCCGATATGTCTCCTTCTGAGACGAAGTCAATGGTGGAAGGGGCGGAGTCACATTTTCCAGAACCAGTGCCGCCGTCGCCGCCTGCGGCACCGTTGAAAGAAGAGTTTACGGAGACAGAGCAGAGCCCGGACAAGTCTCTTCCTATGCCGCTAACGATGTCAACGCCGGGGAGAAACGCGGTGGTGCCAGCCAAGAAACCTTCAAAGGACCGCCACACAAAAGTGGAAGGGCGTGGCAGGAGAATCCGAATGCCGGCCACTTGTGCGGCCAGGATCTTCCAGCTCACGCGAGAGCTCGGCCACAAGTCAGACGGAGAGACCATCCGTTGGTTGCTCGAGCACGCTGAACAGGCTATAATAGAAGCCACCGGCACGGGAACCATCCCCGCAATCGCCGTCTCCGTTGGTGGAACCCTAAAGATCCCAACCTCCTCCCCCGCGAGACCGGATGGACAAGAAACCCCAAGAAAACGAAGACGACGGGCATCGAATAGTGACTTCGTTGACGTGAACGATCCAACGACTATCTCCTCAGGGCTAGCTCCTGTTGCTCCAATTTCATACGGAACAGTTGGTGCATCCGGAGGCGGTGTTGGTCCGGGAGGACTTGTGCCCTTGTGGCCAGTGGGTGGGACCAACGCGTCGGGACCCTTCTTGATGTTCCCAAATACTGCTGGTTCAGCAAATCAACCACAATACTGGGCGATTCCGGCCAGTGCGACGCCGTTTTTCAATGTCCAAGCGAGACCCGTTTCGAACTTCGTCTCTGCGATGATGCATCCCAGTGAACAATTAGGGCCTTCTTCAGGTCCCATAAACGTTTCAAATGGTACTTCGTTTCGGGTTGCGAACTCTTCGTCGACGATGGCTCCTAGCTTGAGCTCAGGAACGAGTCCGACTGTTAGTGCTCCTCCAGCTACTACGACGACGTCGGCGACTCAGATGCTCAGGGATTTCTCTCTGGAAATTTACGACAAGAAAGAACTGCAGTTTTTGGGTCAATCTGCGAATTCTGAACCGCCGAGTTCAGAGCCTTGA 1110 0.5432 MEGKQTQKIEHKHEDFNDEEESHSADMSPSETKSMVEGAESHFPEPVPPSPPAAPLKEEFTETEQSPDKSLPMPLTMSTPGRNAVVPAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEQAIIEATGTGTIPAIAVSVGGTLKIPTSSPARPDGQETPRKRRRRASNSDFVDVNDPTTISSGLAPVAPISYGTVGASGGGVGPGGLVPLWPVGGTNASGPFLMFPNTAGSANQPQYWAIPASATPFFNVQARPVSNFVSAMMHPSEQLGPSSGPINVSNGTSFRVANSSSTMAPSLSSGTSPTVSAPPATTTTSATQMLRDFSLEIYDKKELQFLGQSANSEPPSSEP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4361g00006 369 Pfam TCP family transcription factor 92 163 IPR017887 -
Pral4361g00006 369 MobiDBLite consensus disorder prediction 1 102 - -
Pral4361g00006 369 MobiDBLite consensus disorder prediction 1 27 - -
Pral4361g00006 369 MobiDBLite consensus disorder prediction 309 336 - -
Pral4361g00006 369 MobiDBLite consensus disorder prediction 163 198 - -
Pral4361g00006 369 ProSiteProfiles TCP domain profile. 92 146 IPR017887 -
Pral4361g00006 369 MobiDBLite consensus disorder prediction 175 190 - -
Pral4361g00006 369 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 48 351 IPR005333 GO:0003700
Pral4361g00006 369 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4361g00006 Pral-Chr4361 40309 41908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4361g00006 41 356 TCP Transcription Factor Family AT5G51910 48.308 3.77e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4361g00006 TCP 3.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4361g00006 - - qsa:O6P43_005529 447.973