Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4360g00011 ATGGCCTCATCTTCTTCCACTGCTTCCTCTTCGGCTTCATCTTCTTCCTCTGCTCCATCTTCCCAATCTCCAAAGAAATATGATGTTTTTATTAGCTTCAGAGGTGAGGACACCCGATTCAACTTCACGAGCCACCTTCATGAAGCTCTTCGCAGAAACCAAATATATACATACATCGACTATAGACTTGAGAAAGGAGATGAGGTATGGCCGCCTCTCGAGAAAGCCATTGAAGATTCAACTCTGTTCCTTGTGGTCTTCTCAGAAAACTATGCATCTTCCACATGGTGCCTGAAGGAGCTTGCAAAAATATTAGAGTGCTCCAAAAATCAAGGTTGCTTTGTTATGCCGGTGTTCTATAGAGTGGATCCTTCACATGTGAGGAAGCAGTCTGGGAGTTACAAGAAAGCATTTGAAGAACATGAGTGCAAAAGAAACATCAACAATCAACAACTGCAAAGGTGGGGGGAGGCTCTTACTCAAGCTGCCAATTTGTCTGGTTGGCATTGTGGCTTCAATAGGGATGAAGCGGAACTAATTGAAGAAATAGTGAATCGAGTCATGCAAAAGTTGGGCCCTAGGTATCAAAGTGAATATTATCTAAAAGGCTTGATTGGAATTCACAAAAGAATGGCAGATGTAGAATCATTGTTGGACAAAGGTTCAAACAATGGTGGCTGTCAATTCATTGGAATTTGGGGGATGGGCGGTTTAGGCAAAACAATTCTTGCAGAAGCATTATTTAACAAATTATTTTTTACATGTGAAGGGTCTTGCTTTCTGAACATAATGGAAGAATCGAAGAAATATGGAATGGATGCTTTAAGGAGAGAACTCCTTCGGAGGTTATTAGGGGATAAAGAATCTCACATTGGCAATGCAATATATCCTCATACCATAAGTAGGCTCCGCCGGAAAAAAGTTTTAATTGTGCTTGATGATGTTGATAATCATGCGCAATTAGAAAATCTAGTTGGAAAACTTGAATTTGGACCAGGTAGTAAAATTTTAATAACAACTAGAGATAAGCAAGTGCTTGGTAAGGAAGTGGATGATATATATGCGCTTCATGGTTTGGATCCTGATGAAGCTTTTCAACTTTTCTCCTTGAATGCCTTCAAAAAAGGCTATAGTGATCCAAAGATAAGCGAGCTAGCAAAAAAAGTGATTGGATATGCAGGTGGAAATCCATTGGCCCTAAAGGTTTTAGGCTCCTCCTTGCACGGCAAAAAGCAAGAAGCATGGAAAAGCCAATTTGAAAAGCTTCAAAAATTACCTTGTCCAAAAGTCAATGATATCCTCAAATTGAGCTTTGAAGGACTTGATAATGAGGAAGAGAAAAATATTTTCTCACATATCGTATGTTTTTTCAATGATGATTATGATGTTGAGGATGTAAAAAAATGGTTAGATGCATGCGGTTATTCAACTGAGATTGGATTGATGAGACTTGAAGATAAAGCTCTTTTAGATATTGATGGAGGAAGAATATGTATGCACAGTCTGATAAAACAAATGGGTAAACAAATTGTTCGTGAAGAATCATTAAAACATCCTACATGGTGCAACACATTTTGGCTTTTCCAGAAAAGTTCTGAAATATTGAAGAAAAATATGGTGAAAATGGCCATCAATGGTGAGTTGTGCTCATCAAGCGGACATCTCAGCAAAATTGGTATTTTGGATCTAGGAAGATGCGAAGGTGTGACAAGTTTTCACAAGTTGGTTGACCCGCGTACCCTTCGAGGCCTTGAGGCTGCATACTGTAATAAGCTAGCGTCAAATCTACTTTCCAAATTTGATGAGATGCGTGCTTTGCGATCTAAAGCTGACTGA 1836 0.3911 MASSSSTASSSASSSSSAPSSQSPKKYDVFISFRGEDTRFNFTSHLHEALRRNQIYTYIDYRLEKGDEVWPPLEKAIEDSTLFLVVFSENYASSTWCLKELAKILECSKNQGCFVMPVFYRVDPSHVRKQSGSYKKAFEEHECKRNINNQQLQRWGEALTQAANLSGWHCGFNRDEAELIEEIVNRVMQKLGPRYQSEYYLKGLIGIHKRMADVESLLDKGSNNGGCQFIGIWGMGGLGKTILAEALFNKLFFTCEGSCFLNIMEESKKYGMDALRRELLRRLLGDKESHIGNAIYPHTISRLRRKKVLIVLDDVDNHAQLENLVGKLEFGPGSKILITTRDKQVLGKEVDDIYALHGLDPDEAFQLFSLNAFKKGYSDPKISELAKKVIGYAGGNPLALKVLGSSLHGKKQEAWKSQFEKLQKLPCPKVNDILKLSFEGLDNEEEKNIFSHIVCFFNDDYDVEDVKKWLDACGYSTEIGLMRLEDKALLDIDGGRICMHSLIKQMGKQIVREESLKHPTWCNTFWLFQKSSEILKKNMVKMAINGELCSSSGHLSKIGILDLGRCEGVTSFHKLVDPRTLRGLEAAYCNKLASNLLSKFDEMRALRSKAD 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4360g00011 611 SUPERFAMILY "Winged helix" DNA-binding domain 429 535 IPR036390 -
Pral4360g00011 611 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 192 - -
Pral4360g00011 611 ProSiteProfiles TIR domain profile. 25 191 IPR000157 GO:0007165
Pral4360g00011 611 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 168 IPR035897 -
Pral4360g00011 611 SMART till_3 26 165 IPR000157 GO:0007165
Pral4360g00011 611 Pfam TIR domain 26 206 IPR000157 GO:0007165
Pral4360g00011 611 MobiDBLite consensus disorder prediction 1 24 - -
Pral4360g00011 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 452 IPR027417 -
Pral4360g00011 611 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 581 IPR044974 GO:0006952
Pral4360g00011 611 Gene3D - 197 352 IPR027417 -
Pral4360g00011 611 Pfam NB-ARC domain 213 425 IPR002182 GO:0043531
Pral4360g00011 611 Gene3D - 358 442 IPR042197 -
Pral4360g00011 611 Gene3D - 24 196 IPR035897 -
Pral4360g00011 611 PRINTS Disease resistance protein signature 553 569 - -
Pral4360g00011 611 PRINTS Disease resistance protein signature 302 316 - -
Pral4360g00011 611 PRINTS Disease resistance protein signature 393 407 - -
Pral4360g00011 611 PRINTS Disease resistance protein signature 229 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4360g00011 Pral-Chr4360 157368 164333 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4360g00011 19 526 WRKY Transcription Factor Family AT4G12020 29.389 5.95e-52 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4360g00011 - - pcin:129290880 631.713