Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4360g00010 ATGGCAGATGTAGAATCATTGTTGGACAAAGGTTCAAACAACGGTGGCTGCCAATTCATTGGAATTTGGGGCATGGGCGGTTTGGGCAAAACAACTCTTGCAAAAGCATTGTTTAACAAATTGCATTTTACATATGAAGGGTCTTGCTTTTTGGCTAATGTAAGGGAAGAATCAAAGAAACATGGAATAGATGCTTTGAGGGAAAAAATTGTTTGGAGGTTATTAGGGGATAAAGAATCTCACATTCGCAATGCAATATATCCTTGTACCATAAGTAGGCTTGGTAGGAAAAAAGTTTTCATTGTGCTTGATGATGTTGATGATCTTGAGCAAATAGAAAATCTAGTCCGAGGACTTGAATTTGGATCAGGTAGTAAAATTTTGATAACAACCAGAGATAAGCAAATACTTGGTAATGAAGTGGATGATATATATGCGCTTCATTGTTTGAATCCTGATGAAGCTTTTCAACTTTTCACCTTGAATGCCTTCAAAAAAGGATATGATGGCACAAAGATAAAGGTGCTAGCAGAAAAAGTGACTGAATATGCAGGTGGAAATCCACTGGCCCTAAAGGTTTTAGGCTCCTTCTTGCATGGCAAAAATCAAGAAGCATGGGAAAGCCAACTGGGAAGTATTGAAGGCATGATTATGAACCTTTCAGAAGTTGAAGAGATGGATGTAATTATTAAAGCCTTTCGTTCAATGCCCAATCTGAAATTTCTTAGGTTTTATGGAAATTTGAATGGTCAGCTTAGCAACAAGTTAAATGCTTCTAGTATGAAGCTTTTGCCAAGAAATCTCATGCTATTGGATTGGGTGGGATGCCCTTTAAAGTCCTTGCCAACAACATTCAATGGAGAAAATCTTGTTGAAATAAAAATGCCCAACAGCAATTTGACAAAACTCTGGGATGGAGAGCAGAATCTTGTGAATTTAACCAAAATTGATCTTCATGAATCAAAAGACTTGACTGAGCTCCCAAATTTTTCCAAGGCCATACATCTTGCAGAAGTTTATCTTCATGGTTGTTCAAAATTGCAGAGTGTTCATCCCTCTATTTTATCTCTCCATAGCCTTCGTGGATTATTGCTAAGTGGTTGCAAAGCCCTTACCAGCCTTACGAGCAACACCCATCTCAAATCACTAAGTATGCTCAACTTGACGGGATGCTCAGGACTATGCGAATTTTCAGTGACCTCAGAATATAATTTGTTTGAATTGATGCTTTGTGGAACAGCCATCAATGGTGAGTTGTCCTCATCAAGCGGATGTCTCAGCAAAATTTATTTTTTGGACCTAGAAAGATGCGAAGGGGTGACAAGTCTTCACAAATTGGTTGACAAGCACACCCTCCAACGCCTTCATGCAGATTATTGTAATAAGCTAGCATCAAATCTACGTTCCATATTTGATGAGATGCGTGCTTTGGAAGCTCTAGTGCTGAGGGGTTGTAGTGAATTATTTGAAGTGCCTGACAACATCAGCTTGTTGTCGTCATTAAGTCAGTTAGATCTCTCGAGGAGTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTGCAATGTCTCACCTTAGATGGATGCAAAAGGCTTCTGTCCCTACCACAACTCCCTCCCTCTATCTGTACACTGGAAGCCAATGACTGCTGGTCCCTTGAGACCTTACATTCACCTTTAATGAGTGAAGATATAGAAGGAAAAGGGTATTATTATGATAACTTCAGTTTCGGAAATTGCATGAAGTTGGATGGGCAGTCAATCAAAGCTGTTGAGGCCAAAGTGCTACTTCACATGAATAATAACAAAGACATTTATTACCGGGCTCAAATGGAATATCCAGGAGGAAGAGTCGCGGAGTGGGTCATGTATAGGACTACACAGTCTTTGGTGACTGTGGATCTCAGCTCGATTCCACAACCTTGGGATGGCGCTTTCATTTTTTGTGCCGTGATTTATGGATCACGATCGTGGACTACAATTGGTGCCAAATTGTTTATTGATGGACAATATGCTTACATGTCCCCAGGCGAGTCTTTTCATGTGTCTCGGTTGTCATATCATGTTTGTCTTTGGTACGATGCAGAGTCATGGGGAGAGGTGCAAAGGACAATTGAAGAAAAGAAAAGAGAAGCTCAAAGCAACACTACCTATCATCCATTATTGTTTCAATTTGAATTCACAGCCTTTTCGCCTTATGATGATGAAACAACATTAGCGATCAAAGAGTGTGGGGTGTGCCCGACATCTGCAGTTGAATATCAAAATTACATCAAACAAATTCAATTGGCGTTATTGCATCCACATCGTAGCTCTAATGCAACGCAATCGGCCTGTCAAAAGTACAATCGGCCTGCAAAGAAGCAGTCTGGAAATATAATCACTAGAAAGCATCTGAAGAATATGAGAAGAAGAAACCACAGGTTTGATTTTGAACACTAA 2451 0.3982 MADVESLLDKGSNNGGCQFIGIWGMGGLGKTTLAKALFNKLHFTYEGSCFLANVREESKKHGIDALREKIVWRLLGDKESHIRNAIYPCTISRLGRKKVFIVLDDVDDLEQIENLVRGLEFGSGSKILITTRDKQILGNEVDDIYALHCLNPDEAFQLFTLNAFKKGYDGTKIKVLAEKVTEYAGGNPLALKVLGSFLHGKNQEAWESQLGSIEGMIMNLSEVEEMDVIIKAFRSMPNLKFLRFYGNLNGQLSNKLNASSMKLLPRNLMLLDWVGCPLKSLPTTFNGENLVEIKMPNSNLTKLWDGEQNLVNLTKIDLHESKDLTELPNFSKAIHLAEVYLHGCSKLQSVHPSILSLHSLRGLLLSGCKALTSLTSNTHLKSLSMLNLTGCSGLCEFSVTSEYNLFELMLCGTAINGELSSSSGCLSKIYFLDLERCEGVTSLHKLVDKHTLQRLHADYCNKLASNLRSIFDEMRALEALVLRGCSELFEVPDNISLLSSLSQLDLSRSNIETLPLSIKHLSSLQCLTLDGCKRLLSLPQLPPSICTLEANDCWSLETLHSPLMSEDIEGKGYYYDNFSFGNCMKLDGQSIKAVEAKVLLHMNNNKDIYYRAQMEYPGGRVAEWVMYRTTQSLVTVDLSSIPQPWDGAFIFCAVIYGSRSWTTIGAKLFIDGQYAYMSPGESFHVSRLSYHVCLWYDAESWGEVQRTIEEKKREAQSNTTYHPLLFQFEFTAFSPYDDETTLAIKECGVCPTSAVEYQNYIKQIQLALLHPHRSSNATQSACQKYNRPAKKQSGNIITRKHLKNMRRRNHRFDFEH 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4360g00010 816 Gene3D Ribonuclease Inhibitor 249 401 IPR032675 -
Pral4360g00010 816 PRINTS Disease resistance protein signature 378 394 - -
Pral4360g00010 816 PRINTS Disease resistance protein signature 93 107 - -
Pral4360g00010 816 PRINTS Disease resistance protein signature 19 34 - -
Pral4360g00010 816 PRINTS Disease resistance protein signature 184 198 - -
Pral4360g00010 816 Gene3D - 1 143 IPR027417 -
Pral4360g00010 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 227 442 IPR044974 GO:0006952
Pral4360g00010 816 Pfam NB-ARC domain 3 232 IPR002182 GO:0043531
Pral4360g00010 816 SUPERFAMILY L domain-like 227 559 - -
Pral4360g00010 816 Gene3D Ribonuclease Inhibitor 402 570 IPR032675 -
Pral4360g00010 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 217 IPR027417 -
Pral4360g00010 816 Gene3D - 149 229 IPR042197 -
Pral4360g00010 816 Pfam Leucine Rich Repeat 289 308 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4360g00010 Pral-Chr4360 132720 136017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4360g00010 212 570 WRKY Transcription Factor Family AT4G12020 32.880 3.32e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4360g00010 - - pcin:129290873 436.417