Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4360g00007 ATGGCTTCATCTTCTTCCTCTGTTCCATCTTCTCAATTTCCAAGGAAATATGATGCTTTTATTAGTTTCAGAGGTGAGGACACCCGCTCCAACTTCACAAGCCACCTTCATGAAGCTCTTCTCAGAAACCAAATAGATACATACATCGACAGCAGACTTGAGAAGGGAGATGAGGTATGGCCGTCTCTTGAGAAAGCCATTGAAGATTCAACTCTGTTTCTAGTGGTCTTCTCAGAAAACTATGCATCTTCCACCTGGTGCTTGAAGGAGCTTGCAAAACTATTAGAGTGTTCTGAAAATGAAGGTCACCTTGTTATGCCATTGTTCTATAGAGTAGACCCTTCTGATGTAAGGAAGCAGTCTGGGAGTTACGAGAAAGCATTTGAAGAACATGAGCGCAAAAGAAACATCAATAAGCAACAACTGCAAAAGTGGAGGGAGGCTCTCACTCATGCTGCCAATTTATCTGGCTGGCATTGCAGCTTCGACAGGGACGAAGCCAAGCTGATTACAGAAATAGTGGAATGTGTTATACAGAAGTTGGGTTATAAGTATCAAAGTGAAGATGATCTGAAAGACTTGATTGGAATTCATAGAAGAATTGCATATGTGGAATCGTTGTTGTATAAAGGTTTAAACGACGATGTCCGATTTATTGGCATTTGGGGTATGGGCGGTATGGGCAAAACAACTCTTGCAGAAGCATTATTTAACAAATTGCATTTTGCATATGAAGGGTTTTGCTTTTTGGCTAATGTAAGGGAAGAATCAAAGCTATATGGAATAGCTGCTTTGAAGAAAAAACTTATTTTGACATTATTAGGGAATAAGGAATCTCACATTGGCATGTTTGATGCAACATCTCCTAACGTCATGAGAAAACTACTTGGTCGGAAAAAGACTTTCATTGTTCTTGATGATGTTGATGATTGTGAACAATTAAAAAATTTAGCCGGAAGGCATAATTGGTTTGGGCCGGGCAGTAAAATCTTGATAACAACAAGAGATAAGCAAGTTCTTGATGCTAGTAAGGAAGTAGATGGTATGTATGTGCTTGAGGCTTTGAATCCTGATGAAGCTTTCGATCTATTCTCCATTAATGCCTTTAGAAATGACTATGCTGACCCGAAAATAAAAAGGCTGGCAAAAGAAGTGACTCAATATGCAGATGGAAATCCATTGGCCCTAAAGGTTTTAGGCTCACTCTTGAATGGCAAAAATCAAGAAGCGTGGGAGAGCCAATTGAACAAACTTCAAAAGTTTCCTTGTCCAAAAATTAATAATATCCTCAAATTGAGTTTTGAAGGACTTGATAAGGAAGAAAGAAATATTTTCTTGCATACTGCATGTTTCTTCGATTTCTTCCATCATTATGATGTCAAGGATGTTGAAAAAATGTTAAATGCATGTGGTTACTCAACAGAGATTGGATTGATAAGACTTGAAGAGAAAGCTCTTTTAGATATTCATAAAAGAAGAATACGTATGCACCATCTAATAAAAGAAATGGGTAGAGGAATTGTTCGAGACGAATCATTAGAGGGTGCTCCTCAAAAGTGCAATATATTATGGATTTCCAAGAACAATTCTGGAATATTGAAGGACAGCATGGGAAATGAAGCCACTGAAGGCATGATTCTGAACCTTTCAGAAGTTGAAGAGATGCACGTAATTATTGAAGCTTTTTGTTCAGTGCCCAATCTAAAGTTTCTTGAGTTTTATGGAAATATCAATGGCCGTTTTGAGAACGCGTTAACATTTCCTCGTGGTATGAAGTTTTTGCCAAAAAATCTCATGCTATTGGATTGGGTGGGATGCCCTTTACAGTCCTTGCCGACAACATTTAAGGGTGAAAATCTTGTTGAAATAAAATTGCCCAACAGCAATTTGACAAAACTTTGGAATGGAGAGCAGAATCTTGTGAATTTAAGCAGAATTGATCTTCGTGAATCAAAAGACTTGATTGAGCTCCCAAATTTTTCCAAGGCCATACGTCTTGCAGAAGTTTATCTTCAGGGTTGTTCAAAATTACAAAATGTTCATCCATCTATTTTATCTCTCCATAGCCTTCGCCGTTTACTGCTAAGAGATTGCAAAGCCCTTAAGAGTCTTACGAGCAACACCCATCTCAAATCACTGAGTAAACTGGACTTGACAGGATGCTCAGGACTATGCGAATTTTCAGTGACCTCAGAAAATAATCGGTTTGAATTGATGCTTTGCGGAACAGCCATCAATGATGAGTTGTGCTCATCAAGCGGATGTCTCAGCAAAATTTATTTTTTGAACCTAAAAAGTTGCGAAGGTGTGACAAGTCTTCACAAGTTGGTTGACCCGCATACCCTTCGACTCCTTCATGCTGATTATTGTAATAAGCTAGCATCAAATCTACGTTCCCTATTTGATGAGATGCCTCGTGCTTTGGGAATTCTACGGCTGAATAATTGTAGTGAATTGTTTGAAGTGCCTGACAACATTAGCTTCTTGTCGTCGTTAGGGCAGTTAGATCTCTCAAGGACTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTGCAACGTCTTATCTTAAATGGATGCAAAAGGCTTCGGTCTCTACCACAACTCCCTCCCTCTATCCATACACTGAGCGCCGACGAATGCCTGTCCCTTGAGACCTTACATTCACCTTTAATGAGTGAAGATAGAGAAGGAAAACAGTATTATTGTGATTACTTCATTTTCGGAAATTGCATGAAGTTGGATGGGCAGTCAATCAAAGCCGTTGAGGCCGAAGTTCTACTTGACATAAACAATAACAAAGCCATTGATAACAGGGCTACAATGAAGTATCCGGGAAAAAGAGTTGCAGAGTGGTTCATGTATAGGACTACACAATCTTGTGTGACTGTGGATCTCAATTCCATTCCACAACCTTGGGATGGCGCTTTCATTTTCAGCGCCGTAATTTCTGGATCATCATTGTCGACTACAATTCATGCCAATTTGTTTATTGATGGTCAATCTGCTTGCACGTTTGAAAGCGCCTATTTCTCTGGGTTTCTATTGTCAGATCATGTTGTTCTTTGGCACGATGAAAAGTCATGTGGAGAGGTACAAAGGACAATTGAAGAAAAGAAAAGAGAAGCTCAAAGCAACACTTCTTATCATCCATTATTGCTTCAAATTGAATTCGCAGCCTTTTCGCCTTTTCATGATGAAACAATAGTAGAGATCAAAGAGTGTGGGGTGTGCCCAACATCTGCAGTTGAATATCAAAATTACATCAAACAAATTCAATTGGCATTATTGCATCCACATCGTAGCTCCAATGCAACGCAATCGGCCTCTCGAAAGCGCAAACATCACAGCTCGGATGAATTTCAAGAAATGATTTTGAATTTTAAAGCTCTCAGGTTGAATAATGATCTGCCCACTTCAACTTCATGTTTCACCCTCGCGCCTCCACCCCAAAATGATTGGAGGCCATCTCCCAAAGTGTCTTTTGCCACCAGCGTCGATGGTTCGCTGGTGGCCGGCGCCGGTGAAGTCGGCTTCTTTGAGACCTGGTTTGTCTCCCCCGGCTCCGTCGGCTGGCACTGTCGCTTCATGTCTAAGAATGAACTTATTAATACTGAAGCAGAGCCTAATCAAATGAGGAATGAATCATTTGAGCCTCTGATCGCGGTTATAATTAATAGGGACAATGATCGTGAAGAACATGAAGCCAGTGAAAGCGAACAGGATTCTGACTCGCCCATTATATGTCACCTCATACGCATGGTGTCAGGGCCGTGGCTGTGTCAGTACAAATTTGTTGAGATCCCTTGCCGGCTAAGCAGAGTAGAAGGGCTCATTGTTTCAAAATGA 3858 0.4031 MASSSSSVPSSQFPRKYDAFISFRGEDTRSNFTSHLHEALLRNQIDTYIDSRLEKGDEVWPSLEKAIEDSTLFLVVFSENYASSTWCLKELAKLLECSENEGHLVMPLFYRVDPSDVRKQSGSYEKAFEEHERKRNINKQQLQKWREALTHAANLSGWHCSFDRDEAKLITEIVECVIQKLGYKYQSEDDLKDLIGIHRRIAYVESLLYKGLNDDVRFIGIWGMGGMGKTTLAEALFNKLHFAYEGFCFLANVREESKLYGIAALKKKLILTLLGNKESHIGMFDATSPNVMRKLLGRKKTFIVLDDVDDCEQLKNLAGRHNWFGPGSKILITTRDKQVLDASKEVDGMYVLEALNPDEAFDLFSINAFRNDYADPKIKRLAKEVTQYADGNPLALKVLGSLLNGKNQEAWESQLNKLQKFPCPKINNILKLSFEGLDKEERNIFLHTACFFDFFHHYDVKDVEKMLNACGYSTEIGLIRLEEKALLDIHKRRIRMHHLIKEMGRGIVRDESLEGAPQKCNILWISKNNSGILKDSMGNEATEGMILNLSEVEEMHVIIEAFCSVPNLKFLEFYGNINGRFENALTFPRGMKFLPKNLMLLDWVGCPLQSLPTTFKGENLVEIKLPNSNLTKLWNGEQNLVNLSRIDLRESKDLIELPNFSKAIRLAEVYLQGCSKLQNVHPSILSLHSLRRLLLRDCKALKSLTSNTHLKSLSKLDLTGCSGLCEFSVTSENNRFELMLCGTAINDELCSSSGCLSKIYFLNLKSCEGVTSLHKLVDPHTLRLLHADYCNKLASNLRSLFDEMPRALGILRLNNCSELFEVPDNISFLSSLGQLDLSRTNIETLPLSIKHLSSLQRLILNGCKRLRSLPQLPPSIHTLSADECLSLETLHSPLMSEDREGKQYYCDYFIFGNCMKLDGQSIKAVEAEVLLDINNNKAIDNRATMKYPGKRVAEWFMYRTTQSCVTVDLNSIPQPWDGAFIFSAVISGSSLSTTIHANLFIDGQSACTFESAYFSGFLLSDHVVLWHDEKSCGEVQRTIEEKKREAQSNTSYHPLLLQIEFAAFSPFHDETIVEIKECGVCPTSAVEYQNYIKQIQLALLHPHRSSNATQSASRKRKHHSSDEFQEMILNFKALRLNNDLPTSTSCFTLAPPPQNDWRPSPKVSFATSVDGSLVAGAGEVGFFETWFVSPGSVGWHCRFMSKNELINTEAEPNQMRNESFEPLIAVIINRDNDREEHEASESEQDSDSPIICHLIRMVSGPWLCQYKFVEIPCRLSRVEGLIVSK 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4360g00007 1285 Pfam Leucine Rich Repeat 619 638 IPR011713 -
Pral4360g00007 1285 SUPERFAMILY "Winged helix" DNA-binding domain 425 528 IPR036390 -
Pral4360g00007 1285 SUPERFAMILY L domain-like 546 891 - -
Pral4360g00007 1285 SMART till_3 16 155 IPR000157 GO:0007165
Pral4360g00007 1285 Coils Coil 128 148 - -
Pral4360g00007 1285 Gene3D - 354 438 IPR042197 -
Pral4360g00007 1285 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral4360g00007 1285 Pfam TIR domain 16 197 IPR000157 GO:0007165
Pral4360g00007 1285 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 774 IPR044974 GO:0006952
Pral4360g00007 1285 Gene3D - 184 348 IPR027417 -
Pral4360g00007 1285 Gene3D - 14 183 IPR035897 -
Pral4360g00007 1285 PRINTS Disease resistance protein signature 708 724 - -
Pral4360g00007 1285 PRINTS Disease resistance protein signature 218 233 - -
Pral4360g00007 1285 PRINTS Disease resistance protein signature 295 309 - -
Pral4360g00007 1285 PRINTS Disease resistance protein signature 389 403 - -
Pral4360g00007 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 446 IPR027417 -
Pral4360g00007 1285 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 158 IPR035897 -
Pral4360g00007 1285 Gene3D Ribonuclease Inhibitor 510 733 IPR032675 -
Pral4360g00007 1285 Gene3D Ribonuclease Inhibitor 734 898 IPR032675 -
Pral4360g00007 1285 Pfam NB-ARC domain 213 424 IPR002182 GO:0043531
Pral4360g00007 1285 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4360g00007 Pral-Chr4360 101414 107793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4360g00007 8 897 WRKY Transcription Factor Family AT4G12020 30.363 7.06e-95 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4360g00007 - - pcin:129290874 1055.82