Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4360g00006 ATGGCTTCATCTTCTTCCTCTGCTCCATCTTCTCAATCTCCAAAGAAATATGACGTTTTTATTAATTTCAGAGGTGAGGACACCCGCTTCAACTTCACAGGCCACTTTCATGAAGCTCTTTGCAGAAACCAAATAGATACATACATCGACTATAGACTTGAGAAAGGAGATGAGGTGTGGCCATCTCTTGAGAAAGCCATTGAAGATTCAACTCTGTTCATAGTGATATTCTCAAAAAACTATGCATCTTCCACGTGGTGCCTGAAGGAGCTTGCAAAAATATTAGAGTGCTCCAAAAATCAAGGTTGCTTTGTTATGCCGGTGTTCCACAGAGTGGATCCTTCACATGTGAGGAAGCAGTCTAGGAGTTACCAAAAAGCATTCGAAGAACATGAGCGCAAAAGAAGCATTAACAATCAACAACTGCAAAAGTGGAGGGAGGCTCTTACTCAAGCTGCCAATTTGTCTGGTTGGCATTGTAGCTTCAATAGGGATGAAGCGGAGCTAATTAAAGAAATAGTGAATTGTGTCACGCAAAAGTTGGGCCCTAGGTATCGAAGGGAAGATTATCTAGAAGGCTTGATTGGAATTCACAAAAGAATGGCCGCTATAGAATCATTGTTGGGCAAAGTTTCAAATAATAGTGGTTGCCAATTCATTGGAATTTGGGGCATGGGCGGTTTGGGCAAAACAACTCTTGCAAAAGCATTGTTTAACAAGTTGCATTTTACATATGAAGGGTCTTGCTTTTTGGCTAATGTAAGGGAAGAATCAAAGAAAAATGGGACAGATGCTTTGAGGGAAAAAATTGTTTGGAAGTTATTAGGGGATAAAGAATCTCACTTTGGCAATGCCATATATCCTTATACCATGAGTAGGCTTGGTCGGAAAAAAGTTTTCATTGTGCTTGATGATGTTGAACAATTAGAAAATTTAGTTGGAAGACGTCAGTTTGGATCAGGCAGCAAAGTCTTAATAACAACCAGAGATAAGCAAGTGCTTGGTAAGGAAGTGGATGATATATATGTGCTTTATTGTTTGGATCCTGATGAAGCTTTTCAACTTTTCTCCTTGAATGCTTTCAAAAAAGGCTACAGTGATCCAAAGATAAGAGGGCTAGTAGAAAAGGTGACTGAATATGCAAGTGGAAATCCATTGGCCCTAAAGGTTTTAGGCTCCTTCTTGCACAGCAAAAAGCAAGAAGCATGGAAAAGCCAATTGGAAAAGCTTCAAAAATTTCCTTGTCCAAAAGTCAATGATATCCTCAGATTGAGCTTTGAAGGACTTGATGATGAGGAAGAGAAAAATATTTTCTTGCATATTGCATGTTTTTTCAATTATGATTATGATGTTGAGAGTGTTAAAAAATTGTTAGATGCATGCAGTTATTCAATCGAAATTGGATTGGCGAGACTTGAAGATAAGGCTCTTTTAGATATTGATAGAGGAAAAATATGTATGCACAGTCTGATAAAACAAATGGGTAAACAAATTGTTCGTGAAGAATCATTAAATTATCCAACATGGTGCAACATATTTTGGATTTTCAAGAAAAGTGTTGAAATATTGAAGAAAAATATGGGAAGTATTGAAGGCATGATTATGAACCTTTTAGAAGTTGAAGAGACGCGAGTAATTATTAAAGCATTTCGTTCAATGCCCAATCTAAAGTTTCTCAGGGTTTATGGAAATTTAAATGTTCAGCTTATGAACAAGTTAAATGCTTCTGGTATGATGTTTTTGTCAAGAAACCTCATGCTATTGGATTGGGTAGGATGCCCTTTAAAGACCTTGCCGACAACATTCAAGGGTGAAAATCTTGTTGAAATAAACATGCCCAACAGCAAATTGACAAAACTTTGGGATGGAGAGCAGAGCCTTTGTGATTTAGTGCTAAGAGGTTGCAAAAACCTTACCAGCCTGACGAGCAACACCCATCTCAAATCACTGAGGAACCTGGACATGACAGGGTGCTCAGGACTATGCGAATTTTCGGTTACCACAAATGAAAAATATCGGTCTGTATTGAAGCTCTGTGGAGCAGCCATCAATGGTGAGTTGTGCTCATCAAGTGGACATCTCAGCAAAATTTATCTTTTGAATCTAGAAAAATGCAAAGGTGTGACAAGTCTTCACAAATTGGTTGACGCGCGCACCCTTCGGCGCCTTAATGCTGAATATTGTAATAAGCTAGCATCAAATCTACGTTCCACATTTGATGAGATGCGTGCTTTGCAATATCTAGAGCTAACTGATTGTAGTGAATTATATGAAGTGCCTGACAACATCAGCTTCTTGTCGTCATTAGGTCAGTTAGATCTCTCGAGGAGTAATATAGAGACTTTACCTTTAAGCATAAAAAATCTTTCAAGACTGGAGGTTCTTTTCTTAAATGGATGCGAAAGGCTTCGGTCTCTACCACAACTCCCTCCCTCTATCCGTAGACTGAGCACCAACGACTGCCTGTCCCTTGAGACTTTACATTCACCTTTAATGAGTAGAGATAAAGAGGGAAAACATTATTTTTACTTCAGTTTCAGAAATTGCATGAAGTTGGATGGGCTGTCAATCAAAGCTGTTGAGGCCACGGTGCTACTTTCCATAAATAATAACAAAGACATTGATTACAGGGCTGCAATGGAATATCCGGGAGAAAGAGTTGCAGAGTGGGTCATGTATAGGACTACGCAGTCTTTGGTGACTGTGGATCTCAGTTCCATTCCACAACCTTGGGATGGCGCTTTCATTTTCTGCGCCGTCATTCCTAGATCGTTGTCGAAGTGGACAAATATTAATGCCAAATTGTTTATTGATGGTCAATATGCTTGGGAGTCTAGAAGCGCACCTGTCTATGGGCCCCTGTTGGTAAATCATGTTGTTCTTTGGTACGATGCAGAGTTACGTAGACAAGTACAAAGGAAAATTGAAGACAAGAAAAGACAAGCTCAAAGCAACACTTATCATCCATTGATTCGAATTGAATTCATGTGGGAGGGTGAAGATTTAGGAGAGAGAAAAGAGTGGGGGGTGTGGCCGACATCTACAGTTGAATATCAAAATTACATCAAAAAAATTCAATTGGCATCATTGCATCCACATCGTAGCTCTAATGCGACGCAATCGGCCTCTCAAAAGCGCAAATATCACAGCCTACTTCGATGA 3162 0.3937 MASSSSSAPSSQSPKKYDVFINFRGEDTRFNFTGHFHEALCRNQIDTYIDYRLEKGDEVWPSLEKAIEDSTLFIVIFSKNYASSTWCLKELAKILECSKNQGCFVMPVFHRVDPSHVRKQSRSYQKAFEEHERKRSINNQQLQKWREALTQAANLSGWHCSFNRDEAELIKEIVNCVTQKLGPRYRREDYLEGLIGIHKRMAAIESLLGKVSNNSGCQFIGIWGMGGLGKTTLAKALFNKLHFTYEGSCFLANVREESKKNGTDALREKIVWKLLGDKESHFGNAIYPYTMSRLGRKKVFIVLDDVEQLENLVGRRQFGSGSKVLITTRDKQVLGKEVDDIYVLYCLDPDEAFQLFSLNAFKKGYSDPKIRGLVEKVTEYASGNPLALKVLGSFLHSKKQEAWKSQLEKLQKFPCPKVNDILRLSFEGLDDEEEKNIFLHIACFFNYDYDVESVKKLLDACSYSIEIGLARLEDKALLDIDRGKICMHSLIKQMGKQIVREESLNYPTWCNIFWIFKKSVEILKKNMGSIEGMIMNLLEVEETRVIIKAFRSMPNLKFLRVYGNLNVQLMNKLNASGMMFLSRNLMLLDWVGCPLKTLPTTFKGENLVEINMPNSKLTKLWDGEQSLCDLVLRGCKNLTSLTSNTHLKSLRNLDMTGCSGLCEFSVTTNEKYRSVLKLCGAAINGELCSSSGHLSKIYLLNLEKCKGVTSLHKLVDARTLRRLNAEYCNKLASNLRSTFDEMRALQYLELTDCSELYEVPDNISFLSSLGQLDLSRSNIETLPLSIKNLSRLEVLFLNGCERLRSLPQLPPSIRRLSTNDCLSLETLHSPLMSRDKEGKHYFYFSFRNCMKLDGLSIKAVEATVLLSINNNKDIDYRAAMEYPGERVAEWVMYRTTQSLVTVDLSSIPQPWDGAFIFCAVIPRSLSKWTNINAKLFIDGQYAWESRSAPVYGPLLVNHVVLWYDAELRRQVQRKIEDKKRQAQSNTYHPLIRIEFMWEGEDLGERKEWGVWPTSTVEYQNYIKKIQLASLHPHRSSNATQSASQKRKYHSLLR 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4360g00006 1053 PRINTS Disease resistance protein signature 219 234 - -
Pral4360g00006 1053 PRINTS Disease resistance protein signature 293 307 - -
Pral4360g00006 1053 PRINTS Disease resistance protein signature 381 395 - -
Pral4360g00006 1053 PRINTS Disease resistance protein signature 645 661 - -
Pral4360g00006 1053 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 731 IPR044974 GO:0006952
Pral4360g00006 1053 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Pral4360g00006 1053 Pfam NB-ARC domain 203 415 IPR002182 GO:0043531
Pral4360g00006 1053 Gene3D - 346 430 IPR042197 -
Pral4360g00006 1053 SUPERFAMILY L domain-like 487 831 - -
Pral4360g00006 1053 Gene3D Ribonuclease Inhibitor 674 861 IPR032675 -
Pral4360g00006 1053 Gene3D Ribonuclease Inhibitor 536 673 IPR032675 -
Pral4360g00006 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 441 IPR027417 -
Pral4360g00006 1053 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4360g00006 1053 SMART till_3 16 155 IPR000157 GO:0007165
Pral4360g00006 1053 MobiDBLite consensus disorder prediction 1032 1053 - -
Pral4360g00006 1053 Pfam TIR domain 16 187 IPR000157 GO:0007165
Pral4360g00006 1053 Gene3D - 190 340 IPR027417 -
Pral4360g00006 1053 Gene3D - 14 187 IPR035897 -
Pral4360g00006 1053 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Pral4360g00006 1053 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral4360g00006 1053 MobiDBLite consensus disorder prediction 1032 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4360g00006 Pral-Chr4360 79734 83943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4360g00006 9 816 WRKY Transcription Factor Family AT4G12020 29.262 7.24e-78 278