Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4360g00002 ATGGCCTCATCTTCTTCCACTGCTTCCTCATCGGCTTCATCTTCTTCCTCTGCTCCATCTTCCCAATCTCCAAAGAAATATGATGTTTTTATTAGCTTCAGAGGTGACACCCGATTCAACTTCACAAGCCACCTTCATGAAGCTCTTCGCAGAAACCAAATAGAAACATACATCGACTATAGACTTGAGAAAGGAGATGAGGTATGGCCGTCTCTTGAGAAAGCCATTGAAGATTCAACTCTGTTCCTTGTGGTGTTCTCAGAAAACTATGCATCTTCCACGTGGTGCCTGAAGGAGCTTGCAAAAATATTAGAGTGCTCCAAAAATCAAGGTTGCTTTGTTATGCCGGTGTTCTATAGAGTGGATCCTTCCGATGTGAGGAAGCAGTCTGGGAGTTACAAGAAAGCATTTGAAGAACATGAGTGCAAAAGAAACATCAACAATCAACAACTGCAAAGGTGGAGGGAGGCTCTTACTCAAGCTGCCAATTTGTCTGGTTGGCATTGTGGCTTCAATAGGGATGAAGCGGAGCTAATTAAAGAAATAGTGAATCAAGTCATGCAAAAGTTGGGCCCTTGGTATCAAAGTGAATATTATCTAAAAGGCTTGATTGGAATTCACAAAAGAATGGCAGATGTAGAATCATTGTTGGACAAAGGTTCAAACAATGGTGGCTGTCAATTCATTGGAATTTGGGGGATGGGCGGTTTAGGCAAAACAACTCTTGCAGAAGCATTATTTAACAAATTATTTTTTACATATGAAGGGTCTTGCTTGCTGGACGTAATGGAAGAATCAAAGAAATATGGAATGGATGCTTTAAGGAGAGAATTCCTTTGGAGGTTATTAGGGGATAAAGAATCTCACATTGGCAATGCAATATATCCTCATACCATAAGTAGGCTTCGTCGAAAAAAAGTTTTAATTGTGCTTGATGATGTTGATGATCTTGAACAATTAGAAAATCTAGTTGGAAGACTTGAATTTGGATCAGGTAGCAAAGTCTTAATAACAAGCAGAGATAAGCAAGTGCTTCGTACGAAAGTGGATGATAATAATATATATGCGCTTCATGGTTTGGATCCTGATGAAGCTTTTCAACTTTTCTCCTTAAATGCCTTCAAAAAAGGCTATAGTGATCCAAAGATAAGCGAGCTAGCCCAAAAAGTGATTGAATATGCAGGTGGAAATCCATTGGCCCTAAAGGTTTTAGGCTCCTCCTTGCATGGCAAAAAGCAAGAAGCATGGAAAAGCCAATTTGAAAAGCTTCAAAAATTACCTTGTCCAAAAGTCAATGATATCCTCAAATTGAGCTTTGAAGGACTTGATAATGAGGAAGAGAAAAATATTTTCTCACATATCGCATGTTTTTTCAATTATTATTATGATGTTGAGGATGTAAAAAAATGGTTAGATGCATGCGGTTATTCAACCGATATTGGATTGATGAGTCTTGAAGATAAAGCTCTTTTAAATATTCATGAAGGAAGAATACGCATGCACAATCTGATAAAAGAAATGGGTAAACAAATTGTTCGTGAAGAATCATTAAAACATCCTACATGGTGCAAAACATTTTGGCTTTTCAAGAAAAGTTCTGAACTATTGAAGAAAAATATGGTAAGTATTGAAGGCATGGTTATGAACCTTTCAGAAGTTGAAAAGAGGCGCGTAATTAATAAAGCATTTCGTTCAATGCCCGATCTAAAGTTTCTTAGGGTTTATGGAAATTTAAATGTTCAGCTTAGGAACGAGTTAAATGCTTCTGGTGTGAAGTTTTTGTCAAGAAACCTCATGCTATTGGATTGGGTGGGATGCCCTTTAAGGACCTTGCCGACAACATTCAAGGGTGAAAATCTTGTTGAAATAAACATGCCTGACAGCAAATTGACAAAACTTTGGGATGGAGAGCAGAATGTTCATCCATCTATTTTATCTCTCCATAGCATTAGATGTTTATTGCTAATTCACTGCAAAGCCCTTACCAGCCTTACGAGCAACACCCATCTCAAATCACTGAAGGAACTCTACTTGATGGGATGCTCAGCACTCAGAGAATTTTCGGTGACCTCAGAAATTTTTTTGTCTGACTTGGAACTTTGCTATGTACCCATCAATGGTGAGTTGTGCTCATCAAGCGGACATCTCAGCAAAATTGGTACTTTGATTCTAGGAAGATGCGAAGGTGTGACAAGTTTTCACAAGTTGGTTGACCTGCGTACCCTTGAATGCCTTGAGGCTGCATATTGTAATAAGCTAGCGTCAAATCTACTTTCCAAATTTGATGAGATGCGTGCTTTGCGAGATCTAAAGCTGACTGATTGTAGTGAATTATATGAAGTGCCCGACAACATCAGCTTGTTGTCGACATTATGGCGGTTAGATCTCTCGAGGAGTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTGGAACATCTCATCTTAAATGGATGCAAAAGGCTTCGGTCTCTACCACAACTCCCTCCCTTCATCTCAACACTGTTGGTCGATGACTGCCTGTCCGTTGAGACTTTACATTCACCTTTAATGAGTGAAGATAGAGAAGGAAACCAATATTTTCATCCGACCTTCAGTTTCAGAAATTGCATGAAGTTGGATGGGCAGTCAATCAAAGCTGTTGAGGCCACATTGATACTTGACATAAATAATAACAAAGACAATGATTACGGGGCTACAGTGAAATATCCGGGGAATAGAGTTGCAGAGTGGGTCATGTATAGGACTACAGGGTCTTTCCTGACTGTGGATCTCAGTTCGATTCCACAACCTTGGGATGGCGCTTTCATTTTTTGCGCCGTCACTTCTGGATCACCACGGGTTGCAAAAATTACGGTCAAATTGTTTATTGATGGTCAATGTGCTTCCATGTCTGCATGGTTGTCTCTCAGTGAGTCCATGTTGTCAGATCATGTTGTTCTTTGGTACGATCAATTGTCACGTCGACAACTACAATGGACATTTGAAGAAAAGAAAATAGAAGCCCAAAGCAACACTTATCATCCATTGCTTCAAATTGAATTCGCACCTTGTGATGAAGAAACAACAGTAGAGATCAAAGAGTGTGGGGTGTGCCCGACATCTGCAGTTGAATATCAAAATGACATCAAGCGAATTCAATTGGCATTATTGCATCCACATCGTAGCTCTAATGCAACGCAATCGGCCTCTCGAAAGCGCAAATATCACAGCTTACTTCGATGA 3234 0.3964 MASSSSTASSSASSSSSAPSSQSPKKYDVFISFRGDTRFNFTSHLHEALRRNQIETYIDYRLEKGDEVWPSLEKAIEDSTLFLVVFSENYASSTWCLKELAKILECSKNQGCFVMPVFYRVDPSDVRKQSGSYKKAFEEHECKRNINNQQLQRWREALTQAANLSGWHCGFNRDEAELIKEIVNQVMQKLGPWYQSEYYLKGLIGIHKRMADVESLLDKGSNNGGCQFIGIWGMGGLGKTTLAEALFNKLFFTYEGSCLLDVMEESKKYGMDALRREFLWRLLGDKESHIGNAIYPHTISRLRRKKVLIVLDDVDDLEQLENLVGRLEFGSGSKVLITSRDKQVLRTKVDDNNIYALHGLDPDEAFQLFSLNAFKKGYSDPKISELAQKVIEYAGGNPLALKVLGSSLHGKKQEAWKSQFEKLQKLPCPKVNDILKLSFEGLDNEEEKNIFSHIACFFNYYYDVEDVKKWLDACGYSTDIGLMSLEDKALLNIHEGRIRMHNLIKEMGKQIVREESLKHPTWCKTFWLFKKSSELLKKNMVSIEGMVMNLSEVEKRRVINKAFRSMPDLKFLRVYGNLNVQLRNELNASGVKFLSRNLMLLDWVGCPLRTLPTTFKGENLVEINMPDSKLTKLWDGEQNVHPSILSLHSIRCLLLIHCKALTSLTSNTHLKSLKELYLMGCSALREFSVTSEIFLSDLELCYVPINGELCSSSGHLSKIGTLILGRCEGVTSFHKLVDLRTLECLEAAYCNKLASNLLSKFDEMRALRDLKLTDCSELYEVPDNISLLSTLWRLDLSRSNIETLPLSIKHLSSLEHLILNGCKRLRSLPQLPPFISTLLVDDCLSVETLHSPLMSEDREGNQYFHPTFSFRNCMKLDGQSIKAVEATLILDINNNKDNDYGATVKYPGNRVAEWVMYRTTGSFLTVDLSSIPQPWDGAFIFCAVTSGSPRVAKITVKLFIDGQCASMSAWLSLSESMLSDHVVLWYDQLSRRQLQWTFEEKKIEAQSNTYHPLLQIEFAPCDEETTVEIKECGVCPTSAVEYQNDIKRIQLALLHPHRSSNATQSASRKRKYHSLLR 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4360g00002 1077 Pfam TIR domain 26 204 IPR000157 GO:0007165
Pral4360g00002 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 453 IPR027417 -
Pral4360g00002 1077 ProSiteProfiles TIR domain profile. 25 190 IPR000157 GO:0007165
Pral4360g00002 1077 SUPERFAMILY L domain-like 550 895 - -
Pral4360g00002 1077 Gene3D Ribonuclease Inhibitor 539 693 IPR032675 -
Pral4360g00002 1077 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 191 - -
Pral4360g00002 1077 Gene3D - 199 352 IPR027417 -
Pral4360g00002 1077 SMART till_3 26 164 IPR000157 GO:0007165
Pral4360g00002 1077 MobiDBLite consensus disorder prediction 1 24 - -
Pral4360g00002 1077 Gene3D - 359 443 IPR042197 -
Pral4360g00002 1077 Gene3D - 24 194 IPR035897 -
Pral4360g00002 1077 Pfam Leucine Rich Repeat 619 638 IPR011713 -
Pral4360g00002 1077 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 167 IPR035897 -
Pral4360g00002 1077 Pfam NB-ARC domain 212 426 IPR002182 GO:0043531
Pral4360g00002 1077 Gene3D Ribonuclease Inhibitor 694 856 IPR032675 -
Pral4360g00002 1077 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 845 IPR044974 GO:0006952
Pral4360g00002 1077 SUPERFAMILY "Winged helix" DNA-binding domain 430 536 IPR036390 -
Pral4360g00002 1077 PRINTS Disease resistance protein signature 394 408 - -
Pral4360g00002 1077 PRINTS Disease resistance protein signature 809 825 - -
Pral4360g00002 1077 PRINTS Disease resistance protein signature 228 243 - -
Pral4360g00002 1077 PRINTS Disease resistance protein signature 301 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4360g00002 Pral-Chr4360 19567 29751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4360g00002 19 856 WRKY Transcription Factor Family AT4G12020 28.779 1.03e-76 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4360g00002 - - pcin:129290874 936.791