Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4360g00001 ATGGCTTCCCCTGTTCCATGTTCTCAATATCCAAAGCCACATGATATTTTTATAAGTTTTAGAGGTGAGGACACCCGCGGATGTTTCACCTGCCATCTTTGCGATGCTCTTAGCAGAAGCGGAATAAAAGAAACATTTGTCGACCGCAAACTTCCGAAAGGAAAGGATTTATGGCGATCTCTTGAGAAAGCCATTGAAGATTCAACTATGTATGTTGTGATCTTCTCAGAAAACTTTGCATCTTCCACGTGGTGCTTGGAGGAGCTTACAAAAATATTAGAGCGCTCCAGAAATCAACGTCGCCTTGTTGTGCCAGTGTTCTATAGAGTAGATCCTTCACATGTGAGGAAGCAATCTGAGAGTTACCACACAGCATTTGTAAAACTTGAGGGCAAAGGCATCAGCAAGCAACTACTGCAGAAGTGGAAGAAGTCTCTCACTGTTGCTGCCAATTTGGCTGGCTTCCGCATCTCCGAAGGAGATGATGAAGCAGACCGAATTAAAACTATAGTGAAAAGGGTTACAAAAATTTTGCGCAATCAGTGTCCAAATGAAGATAATCTAGAAGACTTCATTGGAATTAAAAAGAGAATGAAAGATGTAGAATTATTGTTGGACAAGGGGTCCAACGATGTCCGAATTATTTGCATTTGGGGGATGGGCGGTTTGGGCAAAACAACTCTTGCAAGAGCATTGTATAACAAGTGGTGTTCTGAATACAAAGGGTCTCATCATTTTGTGGAAAAAGTGGGAGAAACATCAAAGAATCATGGAGTAGAGGCTGTGAAGAAAGATCTTATTTCGGCATTATTAGGGGATAAAATATCTCACACCAGCCATTATGACATGACAAGACTTAAACGGAAAGAAGTTTTCATTGTTTTGGATGATGTTGATGGTTATGATCAAGTAAACGGTTTGGTTGGAAGACGCAATTGGTTTAAACCAGGTAGTAAAATCTTAATAACAACCAGAGATAAACAAGTCCTTGGTGCTAAAGTAGATCGTGATGCTATATATCAACTGAAGGGTTTGGATTCCAAGGAAGCTTTTCAGCTTTTCTCTTTACATGCCTTCGGAAAAGGCTGCTCTGCCTCTAGCACAAAACTACGAAGGTTGGCACAGGAAGTGACTAGATATGCAAATGGAAATTCATTGGCGCTAAAAGTTTTAGGTTCCTCCTTGTTTGACGAGAAAGATCAAAAAGTTTGGGAAAGCCGATTGAAAAAACTTCCAAAATTATTTGATCTACAAATTAACAAAGTCCTAAAAATAAGTCTTGAAGGACTTCTAAGTAAAGAAAGAGAGTGTTTCTTGGATATCGCATGTCTTTTAACTGGTGACAGTGATGTTGATGGTGATAATGATGTTGAGGGATGTCTTTTCACTGATGGTTTTGTGACGGTAAGAGAGATGCTAGAAGCACGACGTGGTTATCCAATCGCTCATGATTTGAAAAGACTAAGAGAGACAGCTCTTTTAGAAGTTGATGATGAATCTGGGAGAATATCAATGCACGATCTGCTAAGAGAAATGGGTCGACAGCTTGTTCGTGATGAGTCACCAGAGCATCCCGCAAGGCGGAGTCGATTATGGGATCCTAAAGAAATATCCGAAATACTGGGGGGAAAAGAGAGCAATAAAGCCATTGAAGGTGTAAGTCTGAACCTTCCAGAAGTTGGAGAGATGCGCTTAAGTCCCAAGGCCTTTCGTTCAATGCCCAACCTAAAGATTCTTAATTTTTATTTTTATCACAAAATCGATGATGGGGTTGGAATCAAGTTACAAATGCCTGATGGTATAGACTTTTTGCCAGAAAAACTCATAAAATTGTGTTGGATGGGATACCCTTTAAAGTCTTTGCCAGTGAAATTCAAGGCTGAAAATCTTGTTCAATTTGAAATGCCCCACAGCAGTTTGAGAAGACTTTGGGATGGAGTACAGAATCTTCCAAACTTAATCAAAATTACGCTCGCTCAATCAGAAGACTTGATTGAACTCCCAGATTTTTCCAAGGCCACACGTCTTAAACATGTTAATCTCGATCTGTGTTCAAAATTGCGAAGTGTTCATCCATCTATTTTATCTCGCCACAGCCTGCGTCGTTTATGGCTACGCCATTGCAAGTCCCTTGCCAGCCTTACAAGCGATACCCATCTCCGATCTCTCATTCGGCTCGATGCAGGTGGTTGCTCAGGTCTGAAGGAATTTTCAGTGACCTCAGAAAATAATGAGTTCTATTTAGACCTTTCAGGAACTGCCATCAGTGGTGCGTTGCGCTCATCAAGTGGGCATCGCAGCAAAATTCGTTCATTATCTCTAAACAATTGCAGAAATGTGACAAGTGTTCACAAACTGATTAAGCTGGGTGACCTTCGACGTCTCGAAGCTCGAGGGTGTAAAGAGCTAGCATCATGTCTCCTGTCCAAGTGTGAGGAGATGCGTGCTTTGGAAGTTCTATGGCTTCAGGGTTGCAATGAATTATCTGAACTTCCTAATGACATCAGGTTGCTGTCATCATTACTTGAGTTAAATCTCTCAGGGACTCATGTGCGGACGTTGCCTTCAAACATCAAACGTCTTTCAAGCCTGCGATCTCTTAAACTGGATGGATGTAAAAGGCTTCGTCTTCTACCAGAGCTCCCTCCCTCCCTCTTGACATTGAATGCCGCTAACTGCGTATCCCTTGAGACCATACAATATTCACCTTTGATAAACAAAGGTGAAGAAGGAAAAGATAAGGCATGTCCGTGCTTTATATTCACAAATTGCAAGAAGCTGAATCGACGGGCAATCAAAGCTGCTGAGGCAAGAGTGCTACTTGAGATAAATAAAGGCATTTATGACTTTGCTAGATTGGAATATCCAGGAGAAAGACTTCCAAAGTGGTTCGTGTCTAGGAGTACTAAAGAGGATCCCATGACTGTGAATCTCTGTTCGATTCCACGATCTTGGGATGGGAGATTCTATTTTGGAGCCGTCGTTTCTGAATTACCACAGTGGACAGACATTGAGGTCAGATGGTTTGTTGATGGTCAATATGCTTGCAGGGTTGAGGACAGCTCGTCTTTGGCGATTGAGCAGACGTCGTCAGATCATGTTTTTGTTTGGTATCGTCCAGATTCATTGCGACAACTAAAAAGGAAGATTGAATCAAAGGAAAGAGATGCCCAAAGCAAGACTTATCGTCCATGTGTTGAAATTAAATTCAGACTCCGTAAGCCGCGTGGCAAAGTGATAACAGAAGCAAAGATCAAAGAATGTGGGCCTCCTTATGTTTGCAGGGGCATACATGCACTCGTTGCATTATATTTCGACCAATGCACTTCGAGTTTGTTTTCAAGCGACCATCGTCTTCCTCCTCGTCATCAGTCGGCCGTTGACTTCGCCATCAACTGCAAATCTACAATGGTTGCTCCTTTCACAAAGAAGCTGCCTCAAAATTACAGCCGGGCTTTGAAGTCTCGGCATTTGGGGCGTCTAATATTTGATTCTTCAATTTGTATTTCAACCATTATTACTTTGTTGGTTTTGAAACTGGAGTACTCTCTGGCTATCTTTTATGTGAAAACCTTTTTCGCTGAACCAAAAGAAGGTTTCTTCCCTGATGCTACACACGTCACAGCTGGAGGCTTTGCAGAAACTGATCTGCTTGGTCAAGTTAAGAGCGAGTCATCACGGAAGATAATTTGCAGCACCATTGCTAATTCAGGTGTGCTATTTGCATACTCCATTTATGTGAAGCCTAACTATTTGGATTGA 3762 0.4173 MASPVPCSQYPKPHDIFISFRGEDTRGCFTCHLCDALSRSGIKETFVDRKLPKGKDLWRSLEKAIEDSTMYVVIFSENFASSTWCLEELTKILERSRNQRRLVVPVFYRVDPSHVRKQSESYHTAFVKLEGKGISKQLLQKWKKSLTVAANLAGFRISEGDDEADRIKTIVKRVTKILRNQCPNEDNLEDFIGIKKRMKDVELLLDKGSNDVRIICIWGMGGLGKTTLARALYNKWCSEYKGSHHFVEKVGETSKNHGVEAVKKDLISALLGDKISHTSHYDMTRLKRKEVFIVLDDVDGYDQVNGLVGRRNWFKPGSKILITTRDKQVLGAKVDRDAIYQLKGLDSKEAFQLFSLHAFGKGCSASSTKLRRLAQEVTRYANGNSLALKVLGSSLFDEKDQKVWESRLKKLPKLFDLQINKVLKISLEGLLSKERECFLDIACLLTGDSDVDGDNDVEGCLFTDGFVTVREMLEARRGYPIAHDLKRLRETALLEVDDESGRISMHDLLREMGRQLVRDESPEHPARRSRLWDPKEISEILGGKESNKAIEGVSLNLPEVGEMRLSPKAFRSMPNLKILNFYFYHKIDDGVGIKLQMPDGIDFLPEKLIKLCWMGYPLKSLPVKFKAENLVQFEMPHSSLRRLWDGVQNLPNLIKITLAQSEDLIELPDFSKATRLKHVNLDLCSKLRSVHPSILSRHSLRRLWLRHCKSLASLTSDTHLRSLIRLDAGGCSGLKEFSVTSENNEFYLDLSGTAISGALRSSSGHRSKIRSLSLNNCRNVTSVHKLIKLGDLRRLEARGCKELASCLLSKCEEMRALEVLWLQGCNELSELPNDIRLLSSLLELNLSGTHVRTLPSNIKRLSSLRSLKLDGCKRLRLLPELPPSLLTLNAANCVSLETIQYSPLINKGEEGKDKACPCFIFTNCKKLNRRAIKAAEARVLLEINKGIYDFARLEYPGERLPKWFVSRSTKEDPMTVNLCSIPRSWDGRFYFGAVVSELPQWTDIEVRWFVDGQYACRVEDSSSLAIEQTSSDHVFVWYRPDSLRQLKRKIESKERDAQSKTYRPCVEIKFRLRKPRGKVITEAKIKECGPPYVCRGIHALVALYFDQCTSSLFSSDHRLPPRHQSAVDFAINCKSTMVAPFTKKLPQNYSRALKSRHLGRLIFDSSICISTIITLLVLKLEYSLAIFYVKTFFAEPKEGFFPDATHVTAGGFAETDLLGQVKSESSRKIICSTIANSGVLFAYSIYVKPNYLD 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4360g00001 1253 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Pral4360g00001 1253 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 180 - -
Pral4360g00001 1253 Pfam NB-ARC domain 201 412 IPR002182 GO:0043531
Pral4360g00001 1253 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 155 IPR035897 -
Pral4360g00001 1253 Gene3D Ribonuclease Inhibitor 553 745 IPR032675 -
Pral4360g00001 1253 Gene3D Ribonuclease Inhibitor 746 929 IPR032675 -
Pral4360g00001 1253 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 738 IPR044974 GO:0006952
Pral4360g00001 1253 Coils Coil 1043 1063 - -
Pral4360g00001 1253 Pfam Leucine Rich Repeat 629 648 IPR011713 -
Pral4360g00001 1253 SUPERFAMILY L domain-like 505 900 - -
Pral4360g00001 1253 Gene3D - 344 430 IPR042197 -
Pral4360g00001 1253 Pfam TIR domain 14 190 IPR000157 GO:0007165
Pral4360g00001 1253 Gene3D - 175 336 IPR027417 -
Pral4360g00001 1253 SMART till_3 13 152 IPR000157 GO:0007165
Pral4360g00001 1253 PRINTS Disease resistance protein signature 214 229 - -
Pral4360g00001 1253 PRINTS Disease resistance protein signature 381 395 - -
Pral4360g00001 1253 PRINTS Disease resistance protein signature 859 875 - -
Pral4360g00001 1253 PRINTS Disease resistance protein signature 285 299 - -
Pral4360g00001 1253 Gene3D - 12 174 IPR035897 -
Pral4360g00001 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4360g00001 Pral-Chr4360 7945 14788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4360g00001 2 867 WRKY Transcription Factor Family AT4G12020 29.050 1.24e-78 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4360g00001 - - pcin:129290874 782.711