Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4359g00039 ATGGCCTCATCTTCTTCCACTGCTTCCTCTTCGGATTCATCTTCTTCCTCTGCTTTGTCTTTTCAATCTCCAAAGAAATATGATGTTTTTATTAGCTTCAGAGGCGAGGACACCCGCTTCAACTTCACAAGCCACCTTCATGAAGCTCTTCGCACAAACCAAATAAATACATACATCGACTACAGACTTGAGAAAGGAGATGAGGTATGGCCGTCTCTTGAGAAAGCCATTGAAAATTCAACTCTGTTCCTTGTGGTCTTCTCAGAAAACTATGCATCTTCCACGTGGTGCCTGAAGGAGCTTGCAAAAATATTCGAGTGCTCCAAAAATCAAGATCACCTTGTTATGCCGGTGTTCCATAGAGTGGATCCTTCACATGTGAGGAAGCAGTCTGGGAGTTACGAGAGAGCATTTGAAGAACATGAGCGCAAAAGAAACATCAACAATCAACAACTGCAGAAGTGGAGGGAGGCTCTTACTCAAGCTGCCAGTTTGTGTGGTTGGCATTGTGGCTTCAATAGGGATGAAGCGGAGCTAATTAAAGAAATAGTGAATCGTGTCATGCAAAAGTTGGGCTCTAGGTATCAAAGTGAAGATGATCTAAAAGGCCTGGTTGGAATTCACAAAAGAATAGCGGATGTAGAATCATTGTTGTACAAAGGTTCAATAATTGGTGGTTGCCAATTTATTGGAATTTGGGGGATGGGCGGTGTGGGCAAAACAACTCTTGCAAAAGCGTTGTTTAACAAATTGCGTTTTACATATGAAGGGTCTTGCCTTTTGACTAATGTAAGGCAAGAATCAAAGAGACATGGAATAGATGCTTTGAGGGGGAAAATTGTTTGGGAGTTATTAGGGGATAAAGAATCTCACATTGGCAATGCAATATGTCCTTATACCGTCAGTAGGCTTGGTCGGAAAAAGGTTTTCATTGTGCTTGATGACGTTGATGATCTTACACATTTAGAAAAGTTAGTTGGAAGACATGAATTTGGATCAGGTAGTAAAATCTTGATAACAACCAGAGATAAACAAATATTTGGTAATGAAGTGGATGATATATATGTGCTTCGTGGTTTGAATCCTGATGAAGCTTTTAAACTATTCTCCAACAATGCCTTTAGAAATGACTATGTTGACCTAAAGATAAGAGAGCTAGCAGAAGAAGTGACTAAATATGCAGGCGGAAATCCATTAGCCCTAAAGGTTTTAGGCCGCCTCCTATGCGGCAAAAAGCAAGAAGCATGGAAAAGCCAATTGGACAAGCTTCAAAAATTACCTTGTCAAGAAGTCAATAAAATCCTTAGAATGAGCTTTGAAGGACTTGATGATGAGGAAGAGAAAAATATTTTCTTGCACGTCGCATGTTTTTTCAATTATCATTATGATGTTGAGGATGTAAAAAAATTGTTAGATGCATGCAAGTATTCAACCGAGATTGGATTGACAAGACTGGAAGATAAAGCTCTTTTAGATATTTGTGGAAGAAAAATACGTATGCACAGTCTGATAGAACAAATGGGTAAACAAATTGTCCGTGAAGAATCATTAAAATATCTTACATGGTGCAACATATTTTGGATTTCCAAGAAGAGTTCTGCAATATTGAAGGAAAATATGGGACATATTGAAGGCATGATTATTAACCTTTCAGAAGTTGAAGAGATGTGCGTAATTATTAAAGCATTTGATTCAATGCCCAATCTAAAGCTTCTTAAGGTTTGTGGAGATTTGAATGGACAACTTAGGAACAAGTTTAATGCTTCTGATTTTTCCAAGGCCACAAGTCTTGAACATGTTCGTCTCCTGTGGTGCCCAGAATTGCGGAGTGTACATCCATCTATTTTATCTCTGCTCAGCCTGCGTCGTTTAATGCTAGCCGTTTGCAAGTCCCTTACCAGCCTTACAAGCGTTACCCATCTCCAATCTCTCATTGAGCTCGATGTAAGTAGTTGCTCACGTCTGAAGGAATTTTCAGTGACCTCAGAAAATGAAGAGCTCCATTTACGACTTTCACGAGCTGCCATCAGGGGTGCGTTGCGCTCATCAAGTGGGCATCGCAGCAAAATTTGTTCATTAGATCTAGCCGATTGCGGAAAAGTGACAAGCGTTCACAAGTTGATTAAGCTGCGTGGCGTTCGAGATCTTTATGCTGAAGGGTGTAATGAGCTCGCATCACGTCTCCTGTCCAAGTGTGATAAGATGGGTGCTTTGCAAGTTCTATCGCTTGCGCATTGCAATGAATTATCTGAACTTCCTAATGACATCAGGTTGCTGTCATCATTACGTAACTTAAATCTCTCAGGGACTCATGTAGAGACCTTGCCTTCGAGCATCAAACATCTTTCACGCCTGCAACGTCTTCGACTGGATGAATGTGAAAGGCTTCGTTGTCTACCAGAGCTCCCTCCCTCGATCTTGCAATTGAGTGCCGCTGACTGCATATCCCTTGAGACCATGCAATATTCACCTTTGACAAACGAAGGTGAAGAAGGAAAAGGCAAGGAATCGCTGTGGTTTTTTTTCGCAAATTGCAAGAACCTGAATCGACGGGCAATCAAAGCTGCTGAGGCAAGAATGCTACTTGGGATAAAGAAAGCCACTTATGGCTATGCTAGATTGGAATATCCAGGAAAAAGAGTTCCAAAGTGGTTCATGTATAGGGATAAAGGGTCTTCGGTGTCTGTGAATCTCAGTTCGATTCCAAATTCTGAGGATGGGGGATTCCTTTTTTGCGCCGTCTTTTCTAAATTACCATCAGTTGTGGGAGAAAACATTGATGCCAAATGGTTTATTGATGGTAAATATGCTTGCAGGGCCGGTAAAGTGTCGCTTTACCTGGGTCCGCCGGGGCTCTTCAAGGATATTGATCTTTGGCATGTTGGTCTTTGGTGTGTTCCTGATTCACTTGGAGAACTGAAAAGGAAAATTGAAGAAAGGAAAAGAAATGGTCAGAGCAACATGGAGCTTAAAGTTAAATTCGAAGTTCGTTCGGATCATGACAGAATAACAGAGATCAAAAGGTGTGGAGTATGCCCAACATCTGCAGTTGAATATCAAGATGGTGACATTAAACAAATTCAATTGCCATTGCCTCCTCAGCCGGGCTCTAATGCAATGGAAGTGGCCTCTCGAAAGCGCAAATATCGCAGCTAG 3156 0.4129 MASSSSTASSSDSSSSSALSFQSPKKYDVFISFRGEDTRFNFTSHLHEALRTNQINTYIDYRLEKGDEVWPSLEKAIENSTLFLVVFSENYASSTWCLKELAKIFECSKNQDHLVMPVFHRVDPSHVRKQSGSYERAFEEHERKRNINNQQLQKWREALTQAASLCGWHCGFNRDEAELIKEIVNRVMQKLGSRYQSEDDLKGLVGIHKRIADVESLLYKGSIIGGCQFIGIWGMGGVGKTTLAKALFNKLRFTYEGSCLLTNVRQESKRHGIDALRGKIVWELLGDKESHIGNAICPYTVSRLGRKKVFIVLDDVDDLTHLEKLVGRHEFGSGSKILITTRDKQIFGNEVDDIYVLRGLNPDEAFKLFSNNAFRNDYVDLKIRELAEEVTKYAGGNPLALKVLGRLLCGKKQEAWKSQLDKLQKLPCQEVNKILRMSFEGLDDEEEKNIFLHVACFFNYHYDVEDVKKLLDACKYSTEIGLTRLEDKALLDICGRKIRMHSLIEQMGKQIVREESLKYLTWCNIFWISKKSSAILKENMGHIEGMIINLSEVEEMCVIIKAFDSMPNLKLLKVCGDLNGQLRNKFNASDFSKATSLEHVRLLWCPELRSVHPSILSLLSLRRLMLAVCKSLTSLTSVTHLQSLIELDVSSCSRLKEFSVTSENEELHLRLSRAAIRGALRSSSGHRSKICSLDLADCGKVTSVHKLIKLRGVRDLYAEGCNELASRLLSKCDKMGALQVLSLAHCNELSELPNDIRLLSSLRNLNLSGTHVETLPSSIKHLSRLQRLRLDECERLRCLPELPPSILQLSAADCISLETMQYSPLTNEGEEGKGKESLWFFFANCKNLNRRAIKAAEARMLLGIKKATYGYARLEYPGKRVPKWFMYRDKGSSVSVNLSSIPNSEDGGFLFCAVFSKLPSVVGENIDAKWFIDGKYACRAGKVSLYLGPPGLFKDIDLWHVGLWCVPDSLGELKRKIEERKRNGQSNMELKVKFEVRSDHDRITEIKRCGVCPTSAVEYQDGDIKQIQLPLPPQPGSNAMEVASRKRKYRS 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4359g00039 1051 Pfam NB-ARC domain 226 437 IPR002182 GO:0043531
Pral4359g00039 1051 MobiDBLite consensus disorder prediction 1 20 - -
Pral4359g00039 1051 SMART till_3 26 165 IPR000157 GO:0007165
Pral4359g00039 1051 Gene3D - 359 443 IPR042197 -
Pral4359g00039 1051 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 168 IPR035897 -
Pral4359g00039 1051 MobiDBLite consensus disorder prediction 1028 1051 - -
Pral4359g00039 1051 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 193 - -
Pral4359g00039 1051 Gene3D - 24 189 IPR035897 -
Pral4359g00039 1051 SUPERFAMILY L domain-like 499 801 - -
Pral4359g00039 1051 Gene3D - 190 353 IPR027417 -
Pral4359g00039 1051 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 816 IPR044974 GO:0006952
Pral4359g00039 1051 Pfam TIR domain 26 207 IPR000157 GO:0007165
Pral4359g00039 1051 Pfam C-JID domain 876 1012 IPR045344 -
Pral4359g00039 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 453 IPR027417 -
Pral4359g00039 1051 PRINTS Disease resistance protein signature 639 655 - -
Pral4359g00039 1051 PRINTS Disease resistance protein signature 229 244 - -
Pral4359g00039 1051 PRINTS Disease resistance protein signature 303 317 - -
Pral4359g00039 1051 PRINTS Disease resistance protein signature 394 408 - -
Pral4359g00039 1051 Coils Coil 138 158 - -
Pral4359g00039 1051 Gene3D Ribonuclease Inhibitor 482 663 IPR032675 -
Pral4359g00039 1051 Gene3D Ribonuclease Inhibitor 664 849 IPR032675 -
Pral4359g00039 1051 ProSiteProfiles TIR domain profile. 25 191 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4359g00039 Pral-Chr4359 309962 317208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4359g00039 21 818 WRKY Transcription Factor Family AT4G12020 28.227 1.44e-64 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4359g00039 - - pcin:129290880 687.567