Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4359g00038 ATGGCTTCATCTTCTTCCTCTGCTCCATCTTCCCAATCTCCAAAGAAATATGATGTTTTTATTAGCTTCAGAGGTGAGGACACCCGATTCAACTTCACGAGCCACCTTCATGAAGCTCTTCGCAGAAACCAAATATATACATACATCGACTATAGACTTGAGAAAGGAGATGAGGTATGGCCGTCTCTCGAGAAAGCCATTAAAGATTCAACTCTGTTCCTTGTGGTGTTCTCAGAAAACTATGCATCTTCCACGTGGTGCCTGAAGGAGCTTGCAAAAATATTAGAGTGCTCCAAAAATCAAGGTTGCTTTGTTGTGCCGGTGTTCTATAGAGTGGATCCTTCACATGTGAGGAAGCAGTCTGGGAGTTACAAGAAAGCATTTGAAGAACATGAGTGCAAAAGAAACATCAACAATCAACAACTGCAAAGGTGGAGGGAGGCTCTTACTCAAGCTGCCAATTTGTGTGGTTGGCATTGTGGCTTCAATAGGGATGAAGCGGAACTAATTGAAGAAATAGTGAATCGAGTCATGCAAAAGTTGGGCCCTAGGTATCAAAGTGAATATTATCTAAAAGGCTTGATTGGAATTCACAAAAGAATGGCAGATGTAGAATCATTGTTGGACAAAGGTTCAAACAATGGTGGCTGTCAATTCATTGGAATTTGGGGAATGGGCGGTTTAGGCAAAACAGCTCTTGCAGAAGCATTATTTAACAAATTATTTTTCACATATGAAGGGTCTTGCTTTCTGAACGTAATGGAAGAATCAAAGAAATATGGAATGGATGCTTTAAGGAGAGAATTCCTTTGGAGGTTATTAGGGGATAAAGAATCTCACATTGGCAATGCAATATATCCTCATACCATAAGTAGGCTCCGTCGGAAAAAAGTTTTAATTGTGCTTGATGATGTTAATGATCGTGCACAATTAGAAAATCTAGTTGGAAGACTTGAATTTGGACCAGGTACTAAAATTTTAATAACAACTAGGGATAAGCAAGTGCTTGGTAAGGAAGTGGATGATATATATGCGCTTCATGGTTTGGATCCTGATGAAGCTTTTCAACTTTTCTCCTTGAATGCCTTCAAAAAAGGCTATAGTGATCCAAAGATAAGCGAGCTAGCAAAAAAAGTAATTGAATATGCAGGTGGAAATCCATTGGCCCTAAAGGGAAGTATTGAAGGCATGATTATGGACCTTTCGGAAGTTGAAGAGACGGGCGTGATTATTAAAGCATTTCGTTCAATGCCCAATCTAAAGTTTCTTAGGGTTTATGGAAATTTAAATGTTCAGCTTAGGAACAAGTTAAATGCTTCTGGCATGATGTTTTTGTCAAAAAACCTCATGCTATTGGATTGGGTGGGATGCCCTTTAAAGACCTTGCCGACAACATTTAAGGGTGAAAATCTTGTTGAAATAGACATGCCCTTCAGCAAATTGACAAAACTTTGGGATGGAGAGCAGAATCTTGTGAATTTAAGCAGAATCGATCTTCGTGGATCACAAGACTTGATTGAGCTCCCAAATTTTTCCAAGGCCATACATCTTGTCCGAGTTACTCTCGATTATTGCACAAAATTGCAGAATGTTCATCCATCTATTTTATCTCTCCATAGCCTTTCTTGTTTAGAGCTAACAGATTGCAAAACCCTTGCCAGCCTCACAAGCAACACCCATCTCAAATCACTGTGTATACTCAAATTGACAGGATGCTCAGGACTAAGTGAATTTTCGGTGACCTCAGAAAAATATTGGATTCGCTTGTCGCTTCATGACGCAGCCATCAATGGTGAGTTGTGCTCATCAAGCGGACACCTCAGCAGAATTGGTGTTTTGGATCTAGGAAGATGCGAAAGTGTGACAAGTCTCCACAAATTGGTTGACATGCGCACCCTTGAACGCCTTGATGCTGATTATTGTAATAAGTTAGCATCAAATCTGTGTTCCAAATTTGATGAGATGCGTGCTTTGCACTTTCTACGGCTGACTAATTGTAGTGAATTATATGAAGTTCCTGACAACATCAGCTTGTTGGCGTCATTAAATCTGTTAAATCTCTCGTGGAGTAATATAGAGACCTTGCCTTTAAGCATCAAACATCTTTCAAGCCTGCAACGTCTTTTCTTCAAGGGATGCAAAAGGCTTCGGTCTCTACCACAACTCCCTCCCTCTATCTCACTACTGGACGTCAATAACTGCCTGTCCCTTGAGACTTTACATGTACCTTTAATGAGTGTACATTTACCTTTGATTGAAGATAGAGGAGACCTATTATATTATGAAGAATTCAGTTTCAGAAATTGCATGAAGTTGGATGGGCAGTCAATCAAAGCTGTTGAGGCCAGAGTGCTACTTGCCATAAATAACAACAAAGCCATTTATTTCCAGGCTAATATGGAATATCCGGGAAGAAGAGTTGCAGAGTGGGTCATGTATAGGACTACACAGTCTTTCCTGACTGTGGATCTCAGTTCGATTCCACAACCTTGGGATGGCGGTTTCATTTTTTGCGCCGTCATTTCTGGATCATCATGGTGGACAAATATTACAGCCGAATTGTTTATTGATGGTCAACATGCTTCCACGTTTGAGCACTACTCTCTCGGTGAGTACCTGTTATCAGATCATGTTGTTCTTTGGTACGATCAAAGGCAGTGTCGAGAAGTACAAGGGAAAATTGAAGAAAAGAAAATAGAAGCCCAAAGCAACACTTCTTATCATCCATTGCTTCAATTTGAATTCGCAGCCTTTTCGCGTGATGAAACAACAGTAGAGATCAAAGAGTGGGGGGTGTGCCCGACATCTGCAGTTGAATATCAAAATTACATCAAACAAATTCAATTGGCATTATTGCATTGCAAATCGGCCTCTCGAAAGCGCAAATATCACAGCTTACTTCGATGA 2907 0.4032 MASSSSSAPSSQSPKKYDVFISFRGEDTRFNFTSHLHEALRRNQIYTYIDYRLEKGDEVWPSLEKAIKDSTLFLVVFSENYASSTWCLKELAKILECSKNQGCFVVPVFYRVDPSHVRKQSGSYKKAFEEHECKRNINNQQLQRWREALTQAANLCGWHCGFNRDEAELIEEIVNRVMQKLGPRYQSEYYLKGLIGIHKRMADVESLLDKGSNNGGCQFIGIWGMGGLGKTALAEALFNKLFFTYEGSCFLNVMEESKKYGMDALRREFLWRLLGDKESHIGNAIYPHTISRLRRKKVLIVLDDVNDRAQLENLVGRLEFGPGTKILITTRDKQVLGKEVDDIYALHGLDPDEAFQLFSLNAFKKGYSDPKISELAKKVIEYAGGNPLALKGSIEGMIMDLSEVEETGVIIKAFRSMPNLKFLRVYGNLNVQLRNKLNASGMMFLSKNLMLLDWVGCPLKTLPTTFKGENLVEIDMPFSKLTKLWDGEQNLVNLSRIDLRGSQDLIELPNFSKAIHLVRVTLDYCTKLQNVHPSILSLHSLSCLELTDCKTLASLTSNTHLKSLCILKLTGCSGLSEFSVTSEKYWIRLSLHDAAINGELCSSSGHLSRIGVLDLGRCESVTSLHKLVDMRTLERLDADYCNKLASNLCSKFDEMRALHFLRLTNCSELYEVPDNISLLASLNLLNLSWSNIETLPLSIKHLSSLQRLFFKGCKRLRSLPQLPPSISLLDVNNCLSLETLHVPLMSVHLPLIEDRGDLLYYEEFSFRNCMKLDGQSIKAVEARVLLAINNNKAIYFQANMEYPGRRVAEWVMYRTTQSFLTVDLSSIPQPWDGGFIFCAVISGSSWWTNITAELFIDGQHASTFEHYSLGEYLLSDHVVLWYDQRQCREVQGKIEEKKIEAQSNTSYHPLLQFEFAAFSRDETTVEIKEWGVCPTSAVEYQNYIKQIQLALLHCKSASRKRKYHSLLR 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4359g00038 968 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 405 623 IPR044974 GO:0006952
Pral4359g00038 968 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4359g00038 968 SUPERFAMILY L domain-like 400 769 - -
Pral4359g00038 968 Gene3D Ribonuclease Inhibitor 398 585 IPR032675 -
Pral4359g00038 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 392 IPR027417 -
Pral4359g00038 968 PRINTS Disease resistance protein signature 536 552 - -
Pral4359g00038 968 PRINTS Disease resistance protein signature 219 234 - -
Pral4359g00038 968 PRINTS Disease resistance protein signature 383 397 - -
Pral4359g00038 968 PRINTS Disease resistance protein signature 292 306 - -
Pral4359g00038 968 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral4359g00038 968 Pfam Leucine Rich Repeat 470 489 IPR011713 -
Pral4359g00038 968 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Pral4359g00038 968 Gene3D - 187 342 IPR027417 -
Pral4359g00038 968 Gene3D Ribonuclease Inhibitor 586 800 IPR032675 -
Pral4359g00038 968 Pfam NB-ARC domain 203 391 IPR002182 GO:0043531
Pral4359g00038 968 Pfam TIR domain 16 196 IPR000157 GO:0007165
Pral4359g00038 968 SMART till_3 16 155 IPR000157 GO:0007165
Pral4359g00038 968 Gene3D - 14 186 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4359g00038 Pral-Chr4359 295856 300077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4359g00038 393 715 WRKY Transcription Factor Family AT4G12020 29.305 3.79e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4359g00038 - - pcin:129290880 514.612