Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4359g00037 ATGGCTTCATCTTCTTCCTCTGCTCCATCTTCTCAATCTCCAAAGAAATATGATGTTTTTATTAGCTTTAGAGGTGAGGACACCCGCTTCAACTTCACAAGCCACCTTCATGAAGCTCTTCGCAGAAACCAAATAGATACATACATCGACTACAGACTTGAGAAAGGAGATGAGGTATGGCCGTCTCTTGAGAAAGCCATTGAAGATTCAACTCTATTCCTTGTGATCTTCTCAGAAAACTATGCATCTTCCACGTGGTGCCTGAAGGAGCTTGCAAAAATATTAGAGTGCTCCAAAAATCAAGGTTGCTTTGTTATGCCGGTGTTCTATAGAGTGGATCCTTCACATGTGAGGAAGCAGTCCTGGAGTTACGAGAGAGCATTTGAGGAACATGAGCGCAAAAGAAACATCAGCAATCAACAACTACAAAAGTGGAGGGAGGCTCTTACTCAAGCCGCCAATTTGTCCGGTTGGCATTGTAGCTTCAATAGGGATGAAGCGGAGCTAATTAAAGAAATAGTGAATCAAGTCATGCAAAAGTTGGGCCCTAGGTATCAAAGTGAATATTATCTAAAAGGCTTGATTGGAATTCACAAAAGAATGGCAGATGTAGAATCATTGTTGGACAAAGGTTCAAACAATGGTGGCTGTCAATTCATTGGAATTTGGGGGATGGGCGGTTTAGGCAAGACAACTCTTGCAGAAGCATTATTTAACAAATTGCTTTTTACATATGAAGGGTTTTGCTTTCTGAACGTAAGGGAAGAATCAAAGAAATATGGAATGGATGCTTTAAGAAGAGAACTCCTTTGGAGGTTATTAGGGGATAAAGAATCTCACATTGGCAATGCAATATATCCTCATACCATAATAAGTAGGCTCCGTCAGAAAAAAGTTTTAATTGTGCTTGATGATGTTGATGATGTTCAACAATTAGAAAATTTAGTTGGAAGATGTGAATTTGGATTAGGTAGTAAAATCTTGATAACAACCAGAGATAGGCAAGTGCTTGCTTGTATAAAAGTGGTCGATATGTACGCTCTTGATTGTTTGAATCAAGATGAAGCTTTTGATCTATTCTACATCAATACCTTTAGAAATGACTATGCTGACCTGAAGATAAGAAAGCTAGCACAAGAAGTGACTGAATATGCAGGTGGAAATCCATTGGCCCTAAAGGGAGGTATTGAAGGCATGATTATTAACCTTTCAGAAGTTGAAGAGATGTGGGTAATTATTAAAGCATTTGATTCAATGCCCAATCTAAAGCTTCTTAAGGTTTATGGAGATTTGAATGGACAGCCTGGGAACAAGTTAAATGCTTCTGGCATGAAGTTTCTGTCAAGAAATCTCGTGCTATTGGATTGGGTGCGATGCCCTTTAGAGTCATTACCAGCGACATTGAAGGCTGAAAGTCTTGTTCGACTGGAAATGCCCTTCAGCAGATTGACAAGACTTTGGGATGGAGTGCAGAATCTTGTGAACTTAAGTAAAATTATGCTCCGTCAATCAAAAGACTTGATTGAACTCTCAGATTTTTCCAAGGCCACACGTCTTGAAAAGGTTGATCTCGAGCGGTGCTCAAAATTACGGAGTGTACATCCATCTATTTTATCTCTCCACAGCTTGCGCGCTTTATTGCTACACGGGTGCACGTCCCTTACCAGCCTTAAAAGCGATACCCATCTCCAATCTCTCATTCTGCTCGATGCAAGTTATTGCTCAAGTCTGGAGGAATTTTCAGTGACCTCAGAAAATGAAGATCTCTGTTTACATCTTTCAGGAACTGCCATCAGTGGTGCGTTGCGCTCATCGAGTGGGCATCGCAGCAAAATTCGCTCATTATTTCTATTCGGCTGCGGAAATGTGACAAGCGTTCACAAGTTGATTAAGCTGCGAGACCTTCGAAATCTTGATGCTGGAGGGTGTAATGAGCTCGCATCACGTCTCCTGTTCAAGTGTGATAAGATGGGTGCTTTGGAAAGTCCATGGCTTGCGTATTGCAATGAACTATCTGAACTTCCTAATGACATCAGGTTGCTGTCATCATTACGTTTCTTAGATCTCTCACTGTCTCGTGTGCAGACCTTGCCTTCGAGCATCAAACATTTTTCACGCCTGCAATGTCTTAGACTGGATGGATGTAAAAGGCTTCGTTGTCTACCAGAGCTCCCTCCCTCTATCTTGCAATTGATTGCCCCTAACTGCATATCCCTTGAGACCATACAATATTCACCTTTGACAAAGGAAGGTGAAGAAGGAAAAGATAAGGCATGTCCGCTCTTTTTATTCACAAATTGCAAGAAGCTGAATCGACGGTCAATCAAAGATGCTGAGGCAAGAGTGCTACTTGGGATAAAGAAAGCCACTTATGACTATGCTCGATTGGAATATCCAGGAAAAAGAGTTCCAAGGTGGCTCATGTATAGGGATAAAGGGTCTTCGGTGTCTGTGAATCTCAGTTCGATTCCAAATTCTGAGGATGGGGGATTCATTTTCTGCGCCGTCTTTTCTAAATTACCATCAGCCGTGGGAGAAAACATTGATGCCAAATGGTTTATTGATGGTAAATATGCTTGCAGGGCCGCTAAAAGGTCGCTTTACCTGGGTCCGCCGTGGTTCTCAAAGGATGTTGATCTTTGGCATGTTGTTCTTTGGTGTGTTCCTGATTCACTTGGAGAACTAAAAAGGAAAATTGAAGAAAGGAAAAGAAATGGTCAGAGCAACATGGAGCTTAAAGTTAAATTCGAAGTTCGTTCGGATCATGACAGAATAACAGAGATCAAAAGGTGTGGAGTATGCCCAACATCTGCAGTTGAATATCAAGATGGTGACATTAAACAAATTCAATTGCCATTGCCTCATCAGCCGGGCTCTAATGCAATGGAAGCAGCCTCTCGAAAGCGCAAATATCGGAGCTAG 2922 0.4158 MASSSSSAPSSQSPKKYDVFISFRGEDTRFNFTSHLHEALRRNQIDTYIDYRLEKGDEVWPSLEKAIEDSTLFLVIFSENYASSTWCLKELAKILECSKNQGCFVMPVFYRVDPSHVRKQSWSYERAFEEHERKRNISNQQLQKWREALTQAANLSGWHCSFNRDEAELIKEIVNQVMQKLGPRYQSEYYLKGLIGIHKRMADVESLLDKGSNNGGCQFIGIWGMGGLGKTTLAEALFNKLLFTYEGFCFLNVREESKKYGMDALRRELLWRLLGDKESHIGNAIYPHTIISRLRQKKVLIVLDDVDDVQQLENLVGRCEFGLGSKILITTRDRQVLACIKVVDMYALDCLNQDEAFDLFYINTFRNDYADLKIRKLAQEVTEYAGGNPLALKGGIEGMIINLSEVEEMWVIIKAFDSMPNLKLLKVYGDLNGQPGNKLNASGMKFLSRNLVLLDWVRCPLESLPATLKAESLVRLEMPFSRLTRLWDGVQNLVNLSKIMLRQSKDLIELSDFSKATRLEKVDLERCSKLRSVHPSILSLHSLRALLLHGCTSLTSLKSDTHLQSLILLDASYCSSLEEFSVTSENEDLCLHLSGTAISGALRSSSGHRSKIRSLFLFGCGNVTSVHKLIKLRDLRNLDAGGCNELASRLLFKCDKMGALESPWLAYCNELSELPNDIRLLSSLRFLDLSLSRVQTLPSSIKHFSRLQCLRLDGCKRLRCLPELPPSILQLIAPNCISLETIQYSPLTKEGEEGKDKACPLFLFTNCKKLNRRSIKDAEARVLLGIKKATYDYARLEYPGKRVPRWLMYRDKGSSVSVNLSSIPNSEDGGFIFCAVFSKLPSAVGENIDAKWFIDGKYACRAAKRSLYLGPPWFSKDVDLWHVVLWCVPDSLGELKRKIEERKRNGQSNMELKVKFEVRSDHDRITEIKRCGVCPTSAVEYQDGDIKQIQLPLPHQPGSNAMEAASRKRKYRS 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4359g00037 973 SMART till_3 16 155 IPR000157 GO:0007165
Pral4359g00037 973 Gene3D - 186 345 IPR027417 -
Pral4359g00037 973 Gene3D Ribonuclease Inhibitor 587 771 IPR032675 -
Pral4359g00037 973 SUPERFAMILY L domain-like 401 745 - -
Pral4359g00037 973 Coils Coil 128 148 - -
Pral4359g00037 973 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4359g00037 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 393 IPR027417 -
Pral4359g00037 973 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
Pral4359g00037 973 Pfam TIR domain 16 196 IPR000157 GO:0007165
Pral4359g00037 973 MobiDBLite consensus disorder prediction 952 973 - -
Pral4359g00037 973 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pral4359g00037 973 Pfam NB-ARC domain 203 417 IPR002182 GO:0043531
Pral4359g00037 973 Pfam Leucine Rich Repeat 473 491 IPR011713 -
Pral4359g00037 973 Pfam C-JID domain 798 934 IPR045344 -
Pral4359g00037 973 Gene3D - 14 185 IPR035897 -
Pral4359g00037 973 Gene3D Ribonuclease Inhibitor 400 586 IPR032675 -
Pral4359g00037 973 PRINTS Disease resistance protein signature 561 577 - -
Pral4359g00037 973 PRINTS Disease resistance protein signature 219 234 - -
Pral4359g00037 973 PRINTS Disease resistance protein signature 293 307 - -
Pral4359g00037 973 PRINTS Disease resistance protein signature 385 399 - -
Pral4359g00037 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 416 582 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4359g00037 Pral-Chr4359 271407 275943 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4359g00037 415 707 WRKY Transcription Factor Family AT4G12020 33.223 2.19e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4359g00037 - - pcin:129290880 497.278