Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4359g00036 ATGGCGGCTGTAGAATCATTGTTGTGTAAAGGTTCAAATAATGATGGTTGCAAATTCATTGGCATTTGGGGCATGGGCAGTGTGGGCAAAACAACTCTTGCAAGAGCATTGTTTAACAAATTGTGTTTTACATATGATGGGTTTTGCTTTTTGGCTAATGTAAGGGAACAATCAAGGAGACATGGAATAGATGCTTTGAGGGGAAAACTTATTCTGAAGTTATCAGGGGAGAAAGAATCTCACATTGGCATGCTTGATGCAATAGATCCTTATGCCATGAGTAGTAGACTTGATCGGAAAAAAGTTTTCATTGTGCTTGATGATGTTGATGATGTTGAGCAATTACAAAATTTAGTTGGAAGATATGAATTTGGATCAGGTAGTAAAATCTTGATAACAACCAGAGATAGGCAAGTGCTTGCTGGTATAAAAGTGGTTGATATATATGTGCTTGATCGTTTGGATTCTTATGAAGCTTTTGATCTATTATCCATCAATGCCTTTAGAAACGACTATGCTGACAAGAAGATAAAAAAGCTAGCAAAAAAAATGACTCAATATGCAGATGGAAATCCATTGGCGCTAAAGGTTTTAGGCTCACTCTTGAATGGCAAAAATCAAGAAGCATGGGAAAGCCAATTGGACAAGCTTCAAAAATTTCCTTGTGTACAAGTTAATCATATCCTCAAATCGAGCTTCGAACAACTTGATAAGGAAGAGAGAAATATTTTCTTGTACATCGCATGTTTCTTTGATAATTATAATATTGAGGATGTAAAACACATGTTAAATGCATGTGGTTATTCAACCGAGATTGGATTGAAAAGACTTGAAGAGAAAGCTCTTTTAGATGTTCATAAGAAAAGAATAGGTATGCACCATCTGATAAAAGAAATGGGTAGAGAAATTGTCCGTGATGAATCATTAGAGGGTGTTCCTAACAAGTGCAATATATTATGGATTTTCAAGAATAATTCTGAAATATTAAAGAAAAACATGGTGAATGGAGCCATTGAAGGCATGATTATGGACCTTTCGGAAGTTGAACAGATGTACATAATTATTGAAGCTCTTTGTTTAATGCCCAAGCTAATGAATCTTGTGAATTTAAGCAGAATAGATCTTCATGAATCAAAAGACTTGATTGAGCTGCCAAATTTTTCCAAGGCCATACATCTTGCAGAAGTTGATCTCGAAGGTTGTTCAAAATTGCAGAATATTCATCCATCTATTTTATCTCTCCATAGCCTTCGTCATTTATTGCTAAGAAATTGCACAGCTCTTACCAGCCTTACGAGCAACACACATCTCAAATCACTTGCTAAACTCGACATGGTCGGATGCTCAAGACTGAGCGAATTTGCAGTGACCTCAGAAAATAGTGAGTTTCAGTTGTTGCTTCTGGGAACAGCTATCAATGGTGAGTTGTGCTCATCAAGCGGACATCTCAACAAGATTTATTTTTTGAATCTAGACGGATGTGAAGGTGTGACAGGTCTTCACAAACTGTTTGACCTGCACACCCTTCGAAGACTTGATGCTGCTCATTGCAATGAGCTAGCACCAAATCTACATTCCACATTTGATGAGATGCGTGCTTTGCAAGTTCTAAAGCTGAAGGATTGTAGTAAATTGCTTGGATTGCCTGACAATATCAGCTTGTTGTCATCATTACGTGAGTTAGATCTCTCAGGGAGTAATATAGAGGCCTTGCCTTTCAGCATCAAATATCTTTCCAGACTGCAACATCTTTACTTAAATGAATGCAAATCGCTTCGTTCTCTACCAGAACTCCCTCCCTCCATCTCAAGAGTGTCCGCCGATGACTGCCTGTCCCTGGAGACCTTACATTCACCTTTAATGAGTGAAGATAGAGAAGGAACACAATATTATTATTTGCACTTTAGTTTCAAAAATTGCATGAAGTTGGATGGAGAATCAATCAAAGCTGTTGAGGCCAAAGTGCTGCTTGACATAAATAACGAAGCCATTTATTACAGGGCTACAATGAAATATCCAGGAAAAAGAGTTGCAGAGTGGTTCATGTACAGGACTACACAGTCCACCATAACTGTGGATCTCAGTTCGATTCTGCAACCTTGGGGTGCTGGTTTCATTTTCTGCGCCGTCATTTCTGGATCATCAGGGTGGATGAAAATGGATGCTGAATTGTTTATTGATGGACAATATGCTTACACGTCTCCAGGCGAGTCTTTTCCTATGTCCCTGTTGTCAGATCATGTTGTTTTTTGGTATGATGCAGAGTCATGTGGAGAAGTACAAAGGACAATTGAAGAAAAGAAAAGAGAAGCTCAAAGCAACACTTCTTATCGTCCGTTATTGCTTCAAATTAAGTTCACCACATTCTCTTGGGGTTCTGTTGATGAAACAAGAGGACAAATCAAAGAGTGTGGAGTGGGCCTGGCATCTGCGGTTGAATATCAAAATTACATTGAACAAATTCAATTGGCATCTTTGCATCCACACCCTAACTCTAATGCAATGGAATCGGTGTTACAGTCAAAACCTAATTCTGCGGGAATCAAAGTAGGCTGCTCCTGTGACCACACCAATGACAAACAAGTGGTTCCGAGGAAGTCCAAGGATTGTGCCTTCCCAAGCCCATCAACTGTGACATGGAAGAATGGAACACGGGGCTTGAAAGATATTATGTTTTTATGA 2682 0.3881 MAAVESLLCKGSNNDGCKFIGIWGMGSVGKTTLARALFNKLCFTYDGFCFLANVREQSRRHGIDALRGKLILKLSGEKESHIGMLDAIDPYAMSSRLDRKKVFIVLDDVDDVEQLQNLVGRYEFGSGSKILITTRDRQVLAGIKVVDIYVLDRLDSYEAFDLLSINAFRNDYADKKIKKLAKKMTQYADGNPLALKVLGSLLNGKNQEAWESQLDKLQKFPCVQVNHILKSSFEQLDKEERNIFLYIACFFDNYNIEDVKHMLNACGYSTEIGLKRLEEKALLDVHKKRIGMHHLIKEMGREIVRDESLEGVPNKCNILWIFKNNSEILKKNMVNGAIEGMIMDLSEVEQMYIIIEALCLMPKLMNLVNLSRIDLHESKDLIELPNFSKAIHLAEVDLEGCSKLQNIHPSILSLHSLRHLLLRNCTALTSLTSNTHLKSLAKLDMVGCSRLSEFAVTSENSEFQLLLLGTAINGELCSSSGHLNKIYFLNLDGCEGVTGLHKLFDLHTLRRLDAAHCNELAPNLHSTFDEMRALQVLKLKDCSKLLGLPDNISLLSSLRELDLSGSNIEALPFSIKYLSRLQHLYLNECKSLRSLPELPPSISRVSADDCLSLETLHSPLMSEDREGTQYYYLHFSFKNCMKLDGESIKAVEAKVLLDINNEAIYYRATMKYPGKRVAEWFMYRTTQSTITVDLSSILQPWGAGFIFCAVISGSSGWMKMDAELFIDGQYAYTSPGESFPMSLLSDHVVFWYDAESCGEVQRTIEEKKREAQSNTSYRPLLLQIKFTTFSWGSVDETRGQIKECGVGLASAVEYQNYIEQIQLASLHPHPNSNAMESVLQSKPNSAGIKVGCSCDHTNDKQVVPRKSKDCAFPSPSTVTWKNGTRGLKDIMFL 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4359g00036 893 Gene3D - 1 148 IPR027417 -
Pral4359g00036 893 Gene3D Ribonuclease Inhibitor 465 626 IPR032675 -
Pral4359g00036 893 Gene3D Ribonuclease Inhibitor 304 464 IPR032675 -
Pral4359g00036 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 247 IPR027417 -
Pral4359g00036 893 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 482 610 IPR044974 GO:0006952
Pral4359g00036 893 SUPERFAMILY L domain-like 292 615 - -
Pral4359g00036 893 Gene3D - 153 237 IPR042197 -
Pral4359g00036 893 PRINTS Disease resistance protein signature 19 34 - -
Pral4359g00036 893 PRINTS Disease resistance protein signature 435 451 - -
Pral4359g00036 893 PRINTS Disease resistance protein signature 96 110 - -
Pral4359g00036 893 PRINTS Disease resistance protein signature 188 202 - -
Pral4359g00036 893 Pfam NB-ARC domain 8 236 IPR002182 GO:0043531
Pral4359g00036 893 Pfam C-JID domain 672 808 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4359g00036 Pral-Chr4359 257111 260426 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4359g00036 20 689 WRKY Transcription Factor Family AT5G45050 27.520 2.11e-63 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4359g00036 - - ccaj:109805840 442.58