Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4359g00034 ATGGACTCTTTTTCCAAGTTGTCGGGTATACAACATGATGTCTTCATCAGCTTCAGGGGCACAGACACACGTCATGGTTTCCTTAGCCATTTGAGAAAGGAACTGCGGCAGAAGCAAATTGATGCCTACGTAGATGACAGACCTGAAAGTGGAGATCAAATATCACCGGCGCTTTTAAGGGCCATTAAAGAATCACTCATTTCATTGATCATATTTTCAAAGGACTATGCTTCTTCAAAGTGGTGCTTAGAAGAACTTGTGCAGATTATTGAATGTATGGAGAAGCAAAAACAGATTGTAATTCCCGTTTTCTATAACACAGACCCCTCAAATGTGAGACATCAGAAAGGATCTTATGGAGATGCTTTATCGAAACATGGCGAATATTATGAGGAAAGGGTGCCAATTTGGAGATCAGCTTTGAAAGAGGCTGCTAATTTATCTGGGTTTCATTCATCAAATTATGAGGATGAGGCTGAGCTTATAGAAGAAATTGCCAAATCTTTGTCAACAAAGTTGAATATTTTGTACCGAGGTGACTTAACAGATCTTGTTGGAATTGATGAAAGAATTGCAGAATTAGAATCACTGATGGATGAAGGGTCAAAAGATGTCCGTGTCATTGGAATTTGGGGTATGGGCGGTATCGGTAAGACAACCATCGCAGCTGCAATATTCTATCGATCTTGTTTTGAATACGAAGGGCATTGTTTTTTGGCAAACGTGAGAGAAGAAGCTGAAAATCATGGCATTATTTATTTGAAGAATAAAATGCTTTCTTCACTACTGAAGGAAAATGATTTACAAATTGGCACCCCATATCTCATGCCCCCTTTCGTTAGGAGAAGGCTTCTTCGAAAAAGGATTCTGGTTGTTCTTGATGATATTAGTGATTCAGATCACCTTGAAAATTTAGTAGGAGCACTTGATTGCTTTGGATCTGGTAGTAGAGTCTTAATAACTACTAGAGATAAACAAGTACTTGCTAAAAGAGCTGATGAAATATACGAGGTTAAGCCATTGATGTTTGATGATGCTGCTCAACTTTTTATGTTGAATGCCTTTGAGAATAATTACGTAGACATTGAGTGGATTAAATTATCAAGGAAGGTGATTAGTTATGCTAAAGGAATTCCATTGGCTTTGAAAGTTTTGGGCTCCTTTCTTTATGGCAAAAGCAAGGAAGAATGGGAAAGCCAACTTGAGAAGCTAAACAAAATGCCACATGCGAAAATTCAAGATGTGATGAGATTGAGTTATGATCAACTAGATAGGGAAGAGAAGAACATTTTCTTATATATTGCTTGTTTTTTGAAAGGATATGAATCACAACAAATAATACTTCTGTTAAATGCCTGTGGTTTCTCAACAATTATTGGATTGAGGGTCCTCCGAGACAGAGCTCTCATAACTGAAGTTAAAGAATCAGCTATCAGAAAATCAAGAATATTTATGCATGATTTAATACAAGAAATGGGTTGGGAAATTGTTCGAGAAGAATCAATTGATAATCCTGGGAACCGTAGTCGACTATGGGATGCTAATGACATATATCATGTATTAAAACATAACATGGGGACTGAAGCCATTCAAAGCATAACTCTGAATGTGGCAAAAATTGAAGATCTGCAGTTAAGTCCAAAAACTTTGTCCTCAATGGACAATCTGAAATTTCTCAATTTTTATAAAGGTGCTTTTGAAAAGGGGAATTTACATCTTCCCAGTGGTCTTGAATTTTTGTCGAATCAGCTCAGACTTTTGCGTTGGGATGACTACCCTTCCAAGTCATTGCCGGCAACATTTTCGGCTGAAAACATTGTTACTATGAAAATGTACAATAGCAAACTTACAAAACTTTGGGATGGTGTCCAGAACCTCGTGAATTTAAGGGAGATTCAACTTGCTGAATCAGAGTACCTGATTGAGCTTCCTGATTTTTCAGAGGCTAAGCTTCTTAAAAATGTCAATCTTAGCTATTGTACAAGGTTGCGTAGTGTTCATCCTTCTGTTTTAACTCTCCCCAATCTCAACCAATTGAGGCTTGTAGATTGCAAAGCCCTTACTAGCCTTACAAGCAGTGCCCCTCTAAAATCACTTACATTTCTCGTGCTCAGTGGATGTTCGAGACTCCGAGAGTTTTCAGTAACATCAGAGAAAAGGTTAGAACTGTTTCTTTCAAACACAGCCATCAATGATGAACTGTGGTCATCAAGTGGACGCCTTGGCAACATTGAAGAATTGAGTGTAGATGGCTGCCAAAGTCTCACAAATCTCCCCTACAAGTTAGTTGACCTTAGTGGTCTTCGTTCTCTTAGTATTTCTGGTTGCAACAAGTTAGCATCAAATCTGCATTTCCTATTAAATAAGTTACGCAGTTTGAAAAATTTGTCACTGAATAATTGTAGCAGCTTATTTGAACTGCCCGAGAACATTAGTTTCTTGTCATCGTTACGTGAGTTGTCACTCACAGGGTCAACTAATCTGACAACACTGCCTGCTAGCATCAAGCATCTTTTGAGGCTACAATGTCTTAGGTTGGACGAATGCAAAAGGCTTCAATCCCTGCCAGAACTTCCACCCTCTATTGCACACTTGTTTGCAAGGGACTGCACTTCCCTCGAGACCCTAAAGTTAACTTCAATGCCTACAGTCTCATTGGAAGATGAAGTATGCTTTCACTTTGGAAATTGCATGAAATTGGATCGGCAATCAATTAAAGCTATTGAGGCAAAAGCGCTGCTTGAGATGGATAAATTAGTATCAGCTGTTGAAACAGGCACTGCTTGGACTATGCAGGCTCAACTTGTATATCCAGGAAGCAAAGTTCCAGAATGGTTCATGTACAGGTCAACACAGTCTTCCATCACTGTGGATCTCTTCTCCATTCCACGACCTAAGGATTGGAGTTTTATATTCTGTGCAGTTGTTTCTCACTCTGAATCCTTCGTTTACTTTGAAACTGAGTGGTATTTTAGTGATGGCCAACAGGTTTTGGATGAGATTATGTATTACTTTTGCAAACATATTGGCATCATTCAGTCAGATCATGTCTGTCTCTGGTATATCTCAGAGCTTCCTTCACAGGTGCAAAGGATAATTGAAGAGAAGAATACTGATCAGAGCACCACTGGTCATGAATCAGTTGAAATAAAATTCATTGTTAAAACTCCTAGTCCAGTTCCAGTTTTGGATGTCAAGGGGTGTGGGGTATGCCCAACGGGTGCATCAGGATATCGAAATTATATTCAACAAATGGAATCGGTGTTACAGTCACAACCCAATTCATTGGGAATCAAAGGAGGTTGCTCCTGTGACAACACTAATGACAAAGAAGTGGTTCCTAGGAAGTCCAAGGATTTTATCTTCCCAAGCCCACCAACTGGGGCGTCGAAGAATAGAACACGTGGCTTGAAAGATATTATGTTTTTATGA 3432 0.3904 MDSFSKLSGIQHDVFISFRGTDTRHGFLSHLRKELRQKQIDAYVDDRPESGDQISPALLRAIKESLISLIIFSKDYASSKWCLEELVQIIECMEKQKQIVIPVFYNTDPSNVRHQKGSYGDALSKHGEYYEERVPIWRSALKEAANLSGFHSSNYEDEAELIEEIAKSLSTKLNILYRGDLTDLVGIDERIAELESLMDEGSKDVRVIGIWGMGGIGKTTIAAAIFYRSCFEYEGHCFLANVREEAENHGIIYLKNKMLSSLLKENDLQIGTPYLMPPFVRRRLLRKRILVVLDDISDSDHLENLVGALDCFGSGSRVLITTRDKQVLAKRADEIYEVKPLMFDDAAQLFMLNAFENNYVDIEWIKLSRKVISYAKGIPLALKVLGSFLYGKSKEEWESQLEKLNKMPHAKIQDVMRLSYDQLDREEKNIFLYIACFLKGYESQQIILLLNACGFSTIIGLRVLRDRALITEVKESAIRKSRIFMHDLIQEMGWEIVREESIDNPGNRSRLWDANDIYHVLKHNMGTEAIQSITLNVAKIEDLQLSPKTLSSMDNLKFLNFYKGAFEKGNLHLPSGLEFLSNQLRLLRWDDYPSKSLPATFSAENIVTMKMYNSKLTKLWDGVQNLVNLREIQLAESEYLIELPDFSEAKLLKNVNLSYCTRLRSVHPSVLTLPNLNQLRLVDCKALTSLTSSAPLKSLTFLVLSGCSRLREFSVTSEKRLELFLSNTAINDELWSSSGRLGNIEELSVDGCQSLTNLPYKLVDLSGLRSLSISGCNKLASNLHFLLNKLRSLKNLSLNNCSSLFELPENISFLSSLRELSLTGSTNLTTLPASIKHLLRLQCLRLDECKRLQSLPELPPSIAHLFARDCTSLETLKLTSMPTVSLEDEVCFHFGNCMKLDRQSIKAIEAKALLEMDKLVSAVETGTAWTMQAQLVYPGSKVPEWFMYRSTQSSITVDLFSIPRPKDWSFIFCAVVSHSESFVYFETEWYFSDGQQVLDEIMYYFCKHIGIIQSDHVCLWYISELPSQVQRIIEEKNTDQSTTGHESVEIKFIVKTPSPVPVLDVKGCGVCPTGASGYRNYIQQMESVLQSQPNSLGIKGGCSCDNTNDKEVVPRKSKDFIFPSPPTGASKNRTRGLKDIMFL 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4359g00034 1143 Gene3D - 8 177 IPR035897 -
Pral4359g00034 1143 Pfam TIR domain 12 177 IPR000157 GO:0007165
Pral4359g00034 1143 Gene3D Ribonuclease Inhibitor 509 716 IPR032675 -
Pral4359g00034 1143 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Pral4359g00034 1143 Pfam NB-ARC domain 195 421 IPR002182 GO:0043531
Pral4359g00034 1143 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 776 IPR044974 GO:0006952
Pral4359g00034 1143 Gene3D Ribonuclease Inhibitor 717 911 IPR032675 -
Pral4359g00034 1143 Coils Coil 776 796 - -
Pral4359g00034 1143 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Pral4359g00034 1143 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 150 IPR035897 -
Pral4359g00034 1143 Gene3D - 341 424 IPR042197 -
Pral4359g00034 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 434 IPR027417 -
Pral4359g00034 1143 Gene3D - 178 339 IPR027417 -
Pral4359g00034 1143 SUPERFAMILY L domain-like 485 900 - -
Pral4359g00034 1143 SMART till_3 11 147 IPR000157 GO:0007165
Pral4359g00034 1143 PRINTS Disease resistance protein signature 788 804 - -
Pral4359g00034 1143 PRINTS Disease resistance protein signature 207 222 - -
Pral4359g00034 1143 PRINTS Disease resistance protein signature 283 297 - -
Pral4359g00034 1143 PRINTS Disease resistance protein signature 375 389 - -
Pral4359g00034 1143 Pfam C-JID domain 937 1069 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4359g00034 Pral-Chr4359 246328 251182 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4359g00034 12 820 WRKY Transcription Factor Family AT4G12020 32.968 1.06e-110 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4359g00034 - - pcin:129290873 1805.8