Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4359g00021 ATGGCAGATGTTACGTTTATTTGGGATTTAGTGAAAGAAGCTATGGCCATTGTGGGAAAAAGTCTAGAATACAAGAGCACTCGCAAGAACCTCGAGTCAGCCGTTAGGGATTTGAGTCCAAGGCTTGAAAAGATCGAACAAGCCATGAGGCAGATGGATCTCCCAACTGAACATATAGAGAAATTGAAGGAGAAATTAGCAGAAAACAAAGAAGCTCTTGGAAAGCACAAAATCCGTTGGTGGAGTTGCGTCCTTGCCCCATATTCTCAGACCAAACTAGACGAAGGGTTGACTTCCCTAGAAAGGTTAATCTCTGTCGAGACACAAATTCTCATGCTTCAGCATTTGACTGACATCCTCTCCATTCTGAGTTCTCAAGGTCATCGTCCCCTTGGAGGCCCAACCAATTCAGCTCACGACACATATAATGCCGGGACGACACAGATATTCAAGGATCATCTTGATGATGGACACTCCCAATTTACAGTAGGATTGAATGGTGATTCCATGAAAGGGTTGAAGCGCAAGCTGCTTCATGGTGAAGAGCAAGTTCTGAACTTGTATGGTTTACCAGGATCCGGGAAGACCACTAAGGCTAGAAAACTGTGTCTTGATCTCCAAGTCAAAGGTAAATTCAAGTCCAATGTGATCTTTGAGACGTTGGGTTCACAGATTCAAGGCAACGAGTTAATCTGCAAGTTGCAGGATCAACTGTCAAAATATGGGGAAAATGCAGTACTGTTGGTATTGGATGATGTTTGGCCCCACTCAGAAAATATGGTTGACAAGTTACGCCTAAGATCATCAGAATCTAGAATTTTGGTGACTTCAAGAGCTCAAATCAGAACAGTAAAAGCCCGGTTCCCTATGGATCTGCTCTGTAAGGAAGATGCAGAAAAACTTCTCCGTCACTTCGTTCGATCGAGTGACATCGATTTTGATGAGCCAGAAAGACGTAAAATTCTCCTCCAGATAGTTGACGGTTGTGAGGGATTACCATTGGCTATTGAGTTCATCGGAGGCAAACTAAGAGGGAAAGATATCGAAGCGTTTCAAAAGGTGCAATTAGAATGGTCGCGAGGTGATTCAATTCTTGATTCGCATACAGAGTTGCTTGGCCATCTCCAAAATACATTGAATCTTTTGGTAGATGAATCCATCATGGAGTGTTTTATGGACCTTGGGTTATTTCCCGAAGATCATAAAGTCCCCATTACTGCATTGATAGATATGTGGATTGAACTGTATGAACTAAATGAGTCAAGAGGCATAGATGCAATAATCTTCATCAAAGAATTGGTAGCCATGAATTTGGCCGCTGGCATCAAAATTAGAAGGATAGTTGGAATGGACGTGGACAATTATTACAATAACGACTTCCTCATGCAGCATGATCTTTACAGAGAGCTAGCCATCCGCATAAGTGAACAAGAACCAGTAGAGAAGAGAAGGAGACTGATCATTGACATGTCAAATGATCCTCCGAAAGGGTGGCCCCAGCAACAACAAAGTTTAGCTGCTTCTATCCTGTCAATATCAACAGATAAAATGGTCGCTCCAGGTTGGTGCAACAATATACAAGCACCTGATGCTGTGGTTCTGATCTTGAACCTTAACACTGCAGAATATACTTTACCTGAATTCATTAAGGAAATGGGAGGCCTGAAAGTTCTTATAGTCACCAACTGTGGTTTCTGTACCAGTGACTTGAGAAACCTGGAGCTACTTAGTTCCTTATTGAGCCTTAAAAGAATCAGATTGCAGCAAGTTTCAATTCCATCCCTGTGTGATCTGAAGAATGTGCAGAAGCTATCACTTCACATGTGTCAAGTGAAGAATGCTTTCGAGAACACTTCTATTGACTTCTCAAAAGCAATGCCAAAACTGGAAGACTTGAGCATTGAGTATTGTAAAGACTTGGTCAAGTTACCAACCGGGCTCTTCAATATCGTCGCCCTCAAGAGCCTCACTGTAAGTAACTGTCACCAGTTTATTGGACTGCCTGAAGATATTGAAAAGCTTGAGAATTTGAAAACACTAAGGATTAGTTACTGTGCTAATATTGAAGAAATGCCAGAGTCAATCACAAAGCTGAAAAGTCTAAGCCTTCTGGACATATCATTCTGTGTGAGCCTTAAAAAGTTATCAGAAGAAATTAGTAAGCTGCAGAGTCTAACAAAGCTTTATGTGACGGGCTGCCCAGTACGTGCATTGCCTGACTCAGTCATGGGTTTTGAGAAGTTGGAGAGTGTTATATGCGATGAGTATGCATTTTCCTTTTGGGAAGTTATAAAATTGCGCTTTTCTGGGCTGAACATAAAGGTTGCCACCATGGATATTAGCTTGAACTGGCTTTCCTGA 2361 0.4189 MADVTFIWDLVKEAMAIVGKSLEYKSTRKNLESAVRDLSPRLEKIEQAMRQMDLPTEHIEKLKEKLAENKEALGKHKIRWWSCVLAPYSQTKLDEGLTSLERLISVETQILMLQHLTDILSILSSQGHRPLGGPTNSAHDTYNAGTTQIFKDHLDDGHSQFTVGLNGDSMKGLKRKLLHGEEQVLNLYGLPGSGKTTKARKLCLDLQVKGKFKSNVIFETLGSQIQGNELICKLQDQLSKYGENAVLLVLDDVWPHSENMVDKLRLRSSESRILVTSRAQIRTVKARFPMDLLCKEDAEKLLRHFVRSSDIDFDEPERRKILLQIVDGCEGLPLAIEFIGGKLRGKDIEAFQKVQLEWSRGDSILDSHTELLGHLQNTLNLLVDESIMECFMDLGLFPEDHKVPITALIDMWIELYELNESRGIDAIIFIKELVAMNLAAGIKIRRIVGMDVDNYYNNDFLMQHDLYRELAIRISEQEPVEKRRRLIIDMSNDPPKGWPQQQQSLAASILSISTDKMVAPGWCNNIQAPDAVVLILNLNTAEYTLPEFIKEMGGLKVLIVTNCGFCTSDLRNLELLSSLLSLKRIRLQQVSIPSLCDLKNVQKLSLHMCQVKNAFENTSIDFSKAMPKLEDLSIEYCKDLVKLPTGLFNIVALKSLTVSNCHQFIGLPEDIEKLENLKTLRISYCANIEEMPESITKLKSLSLLDISFCVSLKKLSEEISKLQSLTKLYVTGCPVRALPDSVMGFEKLESVICDEYAFSFWEVIKLRFSGLNIKVATMDISLNWLS 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4359g00021 786 Gene3D - 149 287 IPR027417 -
Pral4359g00021 786 PRINTS Disease resistance protein signature 184 199 - -
Pral4359g00021 786 PRINTS Disease resistance protein signature 696 712 - -
Pral4359g00021 786 PRINTS Disease resistance protein signature 329 343 - -
Pral4359g00021 786 Coils Coil 59 79 - -
Pral4359g00021 786 SUPERFAMILY L domain-like 463 762 - -
Pral4359g00021 786 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 360 IPR027417 -
Pral4359g00021 786 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 10 785 IPR039203 GO:0050832
Pral4359g00021 786 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 19 124 IPR008808 -
Pral4359g00021 786 Gene3D - 293 372 IPR042197 -
Pral4359g00021 786 Pfam NB-ARC domain 245 349 IPR002182 GO:0043531
Pral4359g00021 786 Gene3D - 375 472 IPR036388 -
Pral4359g00021 786 Gene3D Ribonuclease Inhibitor 505 779 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4359g00021 Pral-Chr4359 153187 156260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4359g00021 565 752 WRKY Transcription Factor Family AT4G12020 24.057 1.18e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4359g00021 - - pcin:129290628 746.117