Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4359g00016 ATGGCAGACTATGTTTCGCTTGCTTGGGATTTAGCGAAAGATGGTGTGGCTATAGTGACAAGAGGCCTAGAATACAATAGCACTCGCGAAAGTCTGGAGGCAACCGTCACAGATTTGAGTCCAGTGGTTGAAGGGATCGAGGATTCCTTGAAGCGGCTTGATCTCCCAATTGGACTCAAACATGTCCAGGAACTGAAGAAGCTATTGGCAAAAAACACAGAGGCCATTGGAAAGCTCAAAATCCATTGGTGGAATTGCGTGCTTGCGCCATGGTATCAGCAGAAACTTCAAAAAGAAGGGGCCAACTTAGAAAGGTTCGCCTCTGTTCAGACACAAATTCACATCTTTCATCTTCTCACGGAAATCCTCTCTGTGCTGAGTTCCAAAGGTCCTCCTAGCCTCGCACCCCCGACCAACTACGCACATAAATTCGCGGATCCTCTTGATGAGAGATTCCCGAAATTTACAGTGGGATTGGATGGAGATTCTATGCAAGAGTTGAAGAAGAACCTGCTTACTGGTAAAGAGCAAGTAATAAACTTGTATGGTATGCCGGGATCCGGGAAGACCACAATGGCTCAAAAGCTCTGTCGTGATCCTCAAGTCCAAGGTAAATTCAAGAAAAATATCTTCTTTGAGACGCTGGGTTCACAGATTGAAGTGGATGAAGCAATCCAGAAGTTGCGGGATCATGGGCTGGCTAAATATGGCGAAAATCCAGTGCTGTTGGTATTGGACGACGTGTGGCCTCGCACAGAAAATATTGTTGAAATGATAAGTCTGAAACACAAAGATTCGAGAATTCTGGTGACTTCAAGAACTGAAATGAAAGCAGCTGGAAGCCGATGCCTCATGAAACTACTCAGCGACGAAGATGCAGAAAAACTGCTCCGTCACTTCCTTCCATCGAGTGACATCGACCTTGACCCAGACACACGTCAAATTCTCCTCGAGGTACTTGAACGATGCAAGGGTTTGCCTTTGGCTATTAAATCCGTTGGTCATGAACTGCGAGGGAAGGGTACTGTTCAGGCACTTCGACAGGTGCAGTCAAAATGGTCGCAAGGTCACTCTATACTTGATTCCCATCAAGATTTGCTTGCTCGTCTCCAGGATTCAGTGGATGAATCCCACAGGGAATACTTCATGGACCTTGGGTTATTCCCTGAAGATGAAAAAATCCCCATTACTGTACTCATAGACATGTGGAGTGAACTGCATCACCTCAATGAACCAGCAAGCTTGCCTGCAATGGCCATCACCCAAGAATTAATAGCCATGAATTTGGCTGCTGATATCAAAGTTAGAAGGATGGTTGGAAGGGAAGACCTGGACGATTATTACAATAACTACTTCCTTGAGCAGCATGATCTTTTCAGAGAGCTAGCCATCCATATGAGCAAACAGGGACCATTGGAGAGCAGAGAGAGGCTGATCATTGATATGTTTGGGAATCAGACTAATCCTCCAGAATGGTGGCCCGAGCAACAACAGCGTGTAGTTGCTCCTACTATCCTGTCAATATCAACAGATCAAAACATGACTCCAGATTGGTGCAACATTCAAGCAGCCGGTACTGTGGTTCTGATCTTAAATCTTAAGACTGCAGAATACACTTTACCAGAATTCATAAACGAAATGGAAAACCTGAAAGTTCTTATAGTCACCAATTATAAACGTTGCAAAACTGACCTAAGAAGCCTGGAGCCGCTTGGTTCCTTACTGAGCCTTAAAAGAATCAGACTGCAGCAAGTTTCAATTCCCTCCCTGTGTGATCTGAAGAATGTGCACAAGCTATCACTTTACATGTGTGATGTGAAGGAGGCTTTTGAGAACAGTTCCATTGACTTGTCAGAAGCAATGCCAAAACTGGAAGACTTGAGCATCGAGTATTGTGAAGATTTGGTGAAGCTGCCTACTGGGCTCTGCAATATCGTCATCATGAAGAACCTCACCATAAGTGGTTGCAACAAGTTTATCAGGCTACATGAAGAGATTGGGAAACTTGGGAATTTGGAATTACTTAGGATTAATAACTGTGCGAATTTTGAAGAAATGCCAGAATCAATCTCAGAGCTCCAAAGCCTAACCATTCTGGACATCTCATACTGCCGAACCCTTAGAAAATTACCAGACAAGATTGGTAAGATGCAGAATCTGACAAAGCTTTACATGACGGGTTGCCCAATACGAGAATTGCCAGACTCAGTGATGGATTTTAACAAGTTAGAAAGGGTGATATGTGATGAGGATGCATTTCCCTTGTGGGAAGCTATCAGCTCTCGCTTTTCCAGACTGAACATAAATATGGCCGATAGGGATGTTAGCTTAAATTGGCTTTGTTGA 2346 0.4416 MADYVSLAWDLAKDGVAIVTRGLEYNSTRESLEATVTDLSPVVEGIEDSLKRLDLPIGLKHVQELKKLLAKNTEAIGKLKIHWWNCVLAPWYQQKLQKEGANLERFASVQTQIHIFHLLTEILSVLSSKGPPSLAPPTNYAHKFADPLDERFPKFTVGLDGDSMQELKKNLLTGKEQVINLYGMPGSGKTTMAQKLCRDPQVQGKFKKNIFFETLGSQIEVDEAIQKLRDHGLAKYGENPVLLVLDDVWPRTENIVEMISLKHKDSRILVTSRTEMKAAGSRCLMKLLSDEDAEKLLRHFLPSSDIDLDPDTRQILLEVLERCKGLPLAIKSVGHELRGKGTVQALRQVQSKWSQGHSILDSHQDLLARLQDSVDESHREYFMDLGLFPEDEKIPITVLIDMWSELHHLNEPASLPAMAITQELIAMNLAADIKVRRMVGREDLDDYYNNYFLEQHDLFRELAIHMSKQGPLESRERLIIDMFGNQTNPPEWWPEQQQRVVAPTILSISTDQNMTPDWCNIQAAGTVVLILNLKTAEYTLPEFINEMENLKVLIVTNYKRCKTDLRSLEPLGSLLSLKRIRLQQVSIPSLCDLKNVHKLSLYMCDVKEAFENSSIDLSEAMPKLEDLSIEYCEDLVKLPTGLCNIVIMKNLTISGCNKFIRLHEEIGKLGNLELLRINNCANFEEMPESISELQSLTILDISYCRTLRKLPDKIGKMQNLTKLYMTGCPIRELPDSVMDFNKLERVICDEDAFPLWEAISSRFSRLNINMADRDVSLNWLC 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4359g00016 781 PRINTS Disease resistance protein signature 178 193 - -
Pral4359g00016 781 PRINTS Disease resistance protein signature 235 249 - -
Pral4359g00016 781 PRINTS Disease resistance protein signature 691 707 - -
Pral4359g00016 781 PRINTS Disease resistance protein signature 323 337 - -
Pral4359g00016 781 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 21 115 IPR008808 -
Pral4359g00016 781 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 23 780 IPR039203 GO:0050832
Pral4359g00016 781 Gene3D - 374 465 IPR036388 -
Pral4359g00016 781 SUPERFAMILY L domain-like 528 746 - -
Pral4359g00016 781 Gene3D - 148 282 IPR027417 -
Pral4359g00016 781 Pfam NB-ARC domain 163 355 IPR002182 GO:0043531
Pral4359g00016 781 Coils Coil 360 380 - -
Pral4359g00016 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 385 IPR027417 -
Pral4359g00016 781 Gene3D Ribonuclease Inhibitor 518 772 IPR032675 -
Pral4359g00016 781 Gene3D - 287 373 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4359g00016 Pral-Chr4359 125935 130605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4359g00016 179 747 WRKY Transcription Factor Family AT4G12020 21.283 1.33e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4359g00016 - - pcin:129290628 739.569