Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4359g00013 ATGCCTCACTTTGGCTCCATCTTTTGTCCGTCAGCTCCTTCTCCTTCGCCTAGAGTCCTACCCCTTCATTCAAAGCATACGAAGGATCCATCCCCATCACCGGTTTTGGGTTTGCCACCTCCACCTCCTAATAACGATTGCATGTCTCTGACTTGTTCAGAGCCCCTTACATATGCGCCTTCTGGATCACCTTGTGGTTGTGTTTGGCCCCTACAAGTTAAGCTCGACCTTGGCATTGCAATATACAAGTTTTTTCCTCTGGTCTCAAAGCTTGCTGAGGAAATTGCAGCCGGTGTTTCACTTAATCGGAGCCAAGTTCGCATTGTGGGAGCTGATGCAGCTAACCACCAACTAGAGAAGACCAATGTTCTTATAAACCTAGTACCTGAAGGAGTAAATTTCGATGATGCAACCGCATTTTCAATATATAAGAAATTCTGGCACAAGGAGATTCTCACAGATGCTTCCCTCTTTGGATCCTATGAACTGCTCTATGTTCATTATCCAGGTCTTCCACCATCTCCGCCTTTGGCTTCCTCAAGCATCTCTAGTATGGATGATGTGCCATACCCTGGCTATGACTACAATGGAACAATAATGAAACCTTTAGGAGTAAATGTACCAGTGAATGGAAAGCACGGGAGTAGTGAAAGAGGAAGCATGATTATAATAATTGTGTTGTCATGTATAACTGTGTCTGTTCTATTCATTGGAGCTGCCTGGCTGTATCTGTTGAAATGTGGATCTTGTGTTCAACAACCTGAACATATCCCAGATGATTCAATCCTATCATCTTCAAAACCATCAGGGGCTATTAAGTCATTGACCTATGGGAGCATACCAGGTTCTAGATCAATGTCATTCAGCTCTGGAACAATAATATATACAGGATCTGTTAGGACCTTCACTTTGAATGAAATAGAGAAAGCAACAAACAACTTTGATGCTCTCAGAATAATAGGAGAAGGCGGCTTTGGGCTTGTCTATAAAGGTTTTCTACATGATGGGAGGGATGTGGCTGTGAAGATTCTGAAAAGGTATGATCAGCATGGTGGCCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGCCTTCACCACAGAAATCTAGTCAAACTGATAGGTATATGCATGGAGAATCAAACACGCTGCTTAATCTACGAGCTTATCCCTAATGGAAGTGTGGAATCCCACTTGCATGGTTCTGACAAGAAAACTAGTCCACTTGATTGGAATGCTAGGATGAAGATTGCACTTGGTGCAGCACGGGGACTGGCGTATCTCCACGAAGATTCAAATCCCTGTGTGATACACAGAGACTTCAAGTCTAGCAACATCTTGTTGGAACATGATTTTACACCAAAGGTTGCGGATTTTGGATTGGCTAGAACAGCACTGGACGGGGGAAATAAGCACATCTCCACACATGTTATGGGAACATTTGGGTACCTGGCGCCTGAATATGCAATGACTGGCCATCTTCTTGTCAAAAGTGATGTGTACAGCTATGGAGTTGTACTCCTTGAACTCCTAACAGGAAGAAAGCCCGTGGATTTTTCACAGCCACCCGGTCAAGAAAACCTGGTGGCTTGGGTTCGTCCGCTACTCACAAGCAAGGACGGTTTACAGACAATCATAGACCCGGTTTTAGAGAGCAACGTGTCTTTTGAAGCTGTGGTAAAAGTTGCAGCCATTGCATCGACGTGTGTGCAGCCAGAAGTCTCGCAACGCCCTTTCATGGGTGAAGTCGTTCAGGCCTTGAAGTTGGTTTGCTGTGAGTTTGACGATACAAGCATTATGAGATCAAGGAGCTTCCATGAAGAGAGTGTTCTAATCGATGGAGATGGGAAATTTTCAAGAATTTCAGGTGAGATGATGGGTTTCCAGACATTAACAGAATCAAAGTTGCTCAGTCCATTATCAGATCAGGGATTTGAGTCCTTCAGAAGGCATTCTGATTCAGAGCCTCTCACCACGGAGAAAAAAAGGAAGGTATGGCAGAAATTGCGAAGTTCATCAGGAGGAAGCGTTAGTGAGCATGGATTTTCAAACTTCCCCACATCTTGA 2067 0.4432 MPHFGSIFCPSAPSPSPRVLPLHSKHTKDPSPSPVLGLPPPPPNNDCMSLTCSEPLTYAPSGSPCGCVWPLQVKLDLGIAIYKFFPLVSKLAEEIAAGVSLNRSQVRIVGADAANHQLEKTNVLINLVPEGVNFDDATAFSIYKKFWHKEILTDASLFGSYELLYVHYPGLPPSPPLASSSISSMDDVPYPGYDYNGTIMKPLGVNVPVNGKHGSSERGSMIIIIVLSCITVSVLFIGAAWLYLLKCGSCVQQPEHIPDDSILSSSKPSGAIKSLTYGSIPGSRSMSFSSGTIIYTGSVRTFTLNEIEKATNNFDALRIIGEGGFGLVYKGFLHDGRDVAVKILKRYDQHGGREFLAEVEMLSRLHHRNLVKLIGICMENQTRCLIYELIPNGSVESHLHGSDKKTSPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVADFGLARTALDGGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWVRPLLTSKDGLQTIIDPVLESNVSFEAVVKVAAIASTCVQPEVSQRPFMGEVVQALKLVCCEFDDTSIMRSRSFHEESVLIDGDGKFSRISGEMMGFQTLTESKLLSPLSDQGFESFRRHSDSEPLTTEKKRKVWQKLRSSSGGSVSEHGFSNFPTS 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4359g00013 688 FunFam Receptor-like serine/threonine-protein kinase ALE2 390 607 - -
Pral4359g00013 688 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Pral4359g00013 688 Gene3D Transferase(Phosphotransferase) domain 1 390 604 - -
Pral4359g00013 688 Gene3D Phosphorylase Kinase; domain 1 286 389 - -
Pral4359g00013 688 MobiDBLite consensus disorder prediction 647 667 - -
Pral4359g00013 688 MobiDBLite consensus disorder prediction 669 688 - -
Pral4359g00013 688 ProSiteProfiles Protein kinase domain profile. 314 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4359g00013 688 FunFam receptor-like serine/threonine-protein kinase ALE2 287 389 - -
Pral4359g00013 688 MobiDBLite consensus disorder prediction 647 688 - -
Pral4359g00013 688 PANTHER OS01G0750732 PROTEIN 39 611 - -
Pral4359g00013 688 SUPERFAMILY Protein kinase-like (PK-like) 293 587 IPR011009 -
Pral4359g00013 688 CDD STKc_IRAK 320 588 - -
Pral4359g00013 688 Pfam Protein tyrosine and serine/threonine kinase 317 587 IPR001245 GO:0004672|GO:0006468
Pral4359g00013 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Pral4359g00013 688 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4359g00013 Pral-Chr4359 96888 100838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4359g00013 44 681 Receptor kinase-like Gene Family AT5G56890 57.669 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral4359g00013 PK_Tyr_Ser-Thr 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4359g00013 - - gmx:100814040 936.021