Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4358g00002 ATGCAACACCCGACGTTATTTCAATTCACGAAAAGCCATGGATTTCCGGAACAAGAACAGCTCAAGTGTCCACGTTGTGATTCCACAAACACCAAGTTCTGCTACTACAACAATTACAACCTCTCGCAACCACGCCATTTCTGCAAGAGTTGCAGAAGGTACTGGACCAAAGGAGGCACTCTCCGCAACATCCCCGTCGGAGGTGGAAGCCGGAAGAACACAAAGCGATCATCCACCGGCGCCAAACGATTATCCGCAACGCCATCTTCATCATCATCTTCTCCGTCAGTTTCGTCGGCCATAGGAGGCGCAGACCCGACCCGTGTTTATACCGACTCGATGGGTGGGAATTTCAGTTCACTTATGACATCATCATCTTCTGGGCATCAAGGAAGTGTTCTGGAGGGTCTGAATCCAAATGGATCGGATCTGAAAATGGCGGAAGCGGGTGAATTTGGGGCGAAAGTGAGTTCAGTTGAGCGGGTTGTAGATCCGGGTTCGGAGATGCAGAGAAATGGCGATGCAGAGAGGTTTCTGGGTTCGCAAAATGCAGATTCGAGCCGTTGGAATAACGGCAACGAGCGGTCTTATCTTGCGATGTATACATCAGGCTCAGGCTTCCAGTAG 627 0.504 MQHPTLFQFTKSHGFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGTLRNIPVGGGSRKNTKRSSTGAKRLSATPSSSSSSPSVSSAIGGADPTRVYTDSMGGNFSSLMTSSSSGHQGSVLEGLNPNGSDLKMAEAGEFGAKVSSVERVVDPGSEMQRNGDAERFLGSQNADSSRWNNGNERSYLAMYTSGSGFQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4358g00002 208 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 154 IPR045174 GO:0003700|GO:0006355
Pral4358g00002 208 MobiDBLite consensus disorder prediction 165 193 - -
Pral4358g00002 208 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
Pral4358g00002 208 MobiDBLite consensus disorder prediction 121 145 - -
Pral4358g00002 208 MobiDBLite consensus disorder prediction 176 193 - -
Pral4358g00002 208 ProSitePatterns Zinc finger Dof-type signature. 23 59 IPR003851 GO:0003677|GO:0006355
Pral4358g00002 208 MobiDBLite consensus disorder prediction 70 101 - -
Pral4358g00002 208 Pfam Dof domain, zinc finger 19 75 IPR003851 GO:0003677|GO:0006355
Pral4358g00002 208 MobiDBLite consensus disorder prediction 62 108 - -
Pral4358g00002 208 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4358g00002 Pral-Chr4358 26889 27811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4358g00002 15 125 C2C2-Dof Transcription Factor Family AT1G51700 56.000 3.07e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4358g00002 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4358g00002 - - gmx:100798927 239.965