Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4357g00006 ATGGCCACAGTACCAGGGCAGCTCGTATGGGAGATCGTGAAGAAGAACAACTCTTTTTTGGTTAAAGAGTTTGGTAGGGGCACTCAGAGCGTCCAATTCAGCAAAGAGAGCAATAATCTTTACAACCTCAACACTTTCAAGCACTCTGGTTTGGCCAACAAGAAGACCATCACTATTCAACCTGCTGGTAAAGATCAATCTGTCTTGCTTGCAACTACCAAGACAAAGAAACAGAACAAGCCTGCTTCTTTGCTTCATAAATCTGTCATGAAAAAGGAGTTTCCAAGGATGGCAAAGGCTGTGGTAAACCAGGTGGCAGACAACCACTACAGGCCTGATCTTAAGAAGGCAGCCCTTGCAAGGTTGAGTGCTGTTCATAGGAGCCTCAAAGTTGGCAAGTCTGGTGTCAAGAAGAGGAACAGGCAGGCCGTGAAGGTCCGTGGCAGAAAGTGA 453 0.4658 MATVPGQLVWEIVKKNNSFLVKEFGRGTQSVQFSKESNNLYNLNTFKHSGLANKKTITIQPAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFPRMAKAVVNQVADNHYRPDLKKAALARLSAVHRSLKVGKSGVKKRNRQAVKVRGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4357g00006 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Pral4357g00006 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Pral4357g00006 150 FunFam 60S ribosomal protein L28 5 133 - -
Pral4357g00006 150 Gene3D - 6 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4357g00006 Pral-Chr4357 36722 39583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4357g00006 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.126 9.05e-78 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4357g00006 K02903 - gmx:100500189 266.159