Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4356g00002 ATGGATGGTCTTCTTCCCTGGGATGCTTCTGAATTTGCCACCAATATGCCTATCTTGTGGAATACCCACCAACTAGACATTGAAGAGGAAGCAGGCTACTCCATGCCTCACTTGGATTATCAACCAGCTCAAACAGCTATAGAAGAAACATGGAACTTCAACAACAATGCTATTTCAGTTTCCCCGGGCGAATCTCAGAAAAGTAATAACGCTTCTGCAACTTCCAATGGTAGCAGAAAGAACAAGGACGACGTCGTTCTATGTAATGTCAGTGAAATTGAAGAGGCCATCTCCCGGAGCACTTCATCACGTCCATGTGTCGTCGTCAATAATATTTCAGAACCTAACAAGCCCAATCATGCAAAAAAGAGTTTTGGGCTTGTTTCATCATCGTCTTCTTCAAACATAAATTTTCAGCAGCCAAACTCAAGCATATCATCTAATTCCAGTAGTATTGGCCAAGAGCCTGATCAAGAGGCTATAGCATTAATGAAGGAGATGATATATAGGGCTGCGGCTTTCAGGCCTGTGAACTTAGGTTTGGAGGTAGTGGAAAAGCCCAGAAGGAAGAATGTGAGAATATCGACAGATCCACAGACTGTGGCAGCAAGGCAAAGGAGAGAGAGAATAAGTGAGAGGATTAGGGTTTTGCAGAAGATAGTGCCTGGTGGAAGCAAGATGGACACAGCTTCAACGCTTGATGAAGCTGCAAATTATCTAAAGTTTCTCAGGTCACAGGTCAAAGCTTTGGAAAGTCTAGGGGACAAGCTTCATTATTCTATGAACTGTACCCCTCTCTCTTTTACAAACCCTAGTCATCAATATTACTTCAGCAATACCATACCATCCCTCCAATTTAGGGAAGGAGAGTTAACTAGGGTTAAAACATGGGGTCAAATCCATAATCTTCAATGA 915 0.4262 MDGLLPWDASEFATNMPILWNTHQLDIEEEAGYSMPHLDYQPAQTAIEETWNFNNNAISVSPGESQKSNNASATSNGSRKNKDDVVLCNVSEIEEAISRSTSSRPCVVVNNISEPNKPNHAKKSFGLVSSSSSSNINFQQPNSSISSNSSSIGQEPDQEAIALMKEMIYRAAAFRPVNLGLEVVEKPRRKNVRISTDPQTVAARQRRERISERIRVLQKIVPGGSKMDTASTLDEAANYLKFLRSQVKALESLGDKLHYSMNCTPLSFTNPSHQYYFSNTIPSLQFREGELTRVKTWGQIHNLQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4356g00002 304 Gene3D - 199 263 IPR036638 GO:0046983
Pral4356g00002 304 SMART finulus 200 249 IPR011598 GO:0046983
Pral4356g00002 304 MobiDBLite consensus disorder prediction 111 153 - -
Pral4356g00002 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 261 IPR036638 GO:0046983
Pral4356g00002 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 194 243 IPR011598 GO:0046983
Pral4356g00002 304 MobiDBLite consensus disorder prediction 59 81 - -
Pral4356g00002 304 Coils Coil 233 253 - -
Pral4356g00002 304 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 20 271 IPR045843 GO:0003700|GO:0006355
Pral4356g00002 304 Pfam Helix-loop-helix DNA-binding domain 204 243 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4356g00002 Pral-Chr4356 8573 9626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4356g00002 111 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 65.839 3.70e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4356g00002 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4356g00002 - - pcin:129290347 282.337