Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4355g00012 ATGGAAGGTATCCCAGCGACTTCATTTCAAAATGATGGGAATCTAAAATCGAAAAACCGTGCATTTAATCACTTGCAAGTTCTTAGTATTACCAATTCCTTTGAGAATGTTATTGGAGAAGGGGGGTTTGGAAAAGTGTACCTAGGCACACTACAAGATGGTACAAAAGTTGCAGTCAAGTTACTCTCCAAATCATCACAACAAGGGTTCAAGGAATTTCAGTCAGAGGCAGAACTTTTGATGGTTGTTCATCATAGGAACTTGGTTTCTCTTGTTGGCTATTGTAATGATGGTGAGACGAAAGCACTAGTTTATGAATACATGAGTGAAGGAAATCTCCGACAGAAATTATCAGACAGGAATCCATGTGCTTTGAAATGGAATGAGAGACTTCAGATAGCACTGGATGCAGCATGTGGATTGGACTATCTACATAATGGTTGTAAGCCAGCCATAATTCATAGAGACCTAAAACCTTCCAACATCTTGCTGAGCAAAAATATGCAAGCTAAGATTGCTGACTTTGGATTATCCAGAGTTTTTTTCGATGATACTACTAATGCTCAGTATTCAACTTGTCCGGCTGGCACAATAGGTTATCTAGATCCTGAATTCCATAGCTGTGGAAACCTGAATAAGAAAAGCGATGTTTATAGTTTTGGGATAATTTTGCTTGAGCTTATGAGTGGTCGGCCAGCGGTAATGAGAGCACCCGGCAGCAAAAGTCACATATCTGATTGGGTGGCTCCAAAACTAGAGAGTGGGGACATCCAGTCCATTATGGATCCAAGATTAGAGGGAAAGTTCAATAATGCTTCAGCATGGAAATTTTTAGAGATAGCCATGTCTTGCATTCCACAAGTTGCAATTCAAAGGGCTGATATAGGCCATGTAGTAGCTGATTTAAAGGAATGTCTGGCCTTGGAAATGTCCCTTCAAAATGCAGAAAGTAACAGCGGCGGAACTTCTGGATCTGCTTTGAGTACCACTTATTTTCCACTTGAATCAAACTCCGGTCCATGTGCTAGGTAG 1032 0.407 MEGIPATSFQNDGNLKSKNRAFNHLQVLSITNSFENVIGEGGFGKVYLGTLQDGTKVAVKLLSKSSQQGFKEFQSEAELLMVVHHRNLVSLVGYCNDGETKALVYEYMSEGNLRQKLSDRNPCALKWNERLQIALDAACGLDYLHNGCKPAIIHRDLKPSNILLSKNMQAKIADFGLSRVFFDDTTNAQYSTCPAGTIGYLDPEFHSCGNLNKKSDVYSFGIILLELMSGRPAVMRAPGSKSHISDWVAPKLESGDIQSIMDPRLEGKFNNASAWKFLEIAMSCIPQVAIQRADIGHVVADLKECLALEMSLQNAESNSGGTSGSALSTTYFPLESNSGPCAR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4355g00012 343 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 108 316 - -
Pral4355g00012 343 Gene3D Transferase(Phosphotransferase) domain 1 109 322 - -
Pral4355g00012 343 SUPERFAMILY Protein kinase-like (PK-like) 17 302 IPR011009 -
Pral4355g00012 343 FunFam Leucine-rich repeat receptor-like protein kinase 10 107 - -
Pral4355g00012 343 PANTHER OS07G0107800 PROTEIN-RELATED 17 310 - -
Pral4355g00012 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Pral4355g00012 343 ProSitePatterns Protein kinases ATP-binding region signature. 38 60 IPR017441 GO:0005524
Pral4355g00012 343 SMART serkin_6 32 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00012 343 Gene3D Phosphorylase Kinase; domain 1 38 108 - -
Pral4355g00012 343 CDD STKc_IRAK 38 304 - -
Pral4355g00012 343 ProSiteProfiles Protein kinase domain profile. 32 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00012 343 Pfam Protein tyrosine and serine/threonine kinase 34 232 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4355g00012 Pral-Chr4355 191591 194266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4355g00012 15 313 Receptor kinase-like Gene Family AT4G29180 51.438 3.86e-106 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4355g00012 PK_Tyr_Ser-Thr 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4355g00012 - - pcin:129289825 540.036