Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4355g00011 ATGGCAGATGACGGAAGTGTTGTGGACTCGGGTCAAATATATAATTTATCTTCTGAATACGCCCTTGACGGTAACGATGAGCAGGTTTGGCAGCAGATGAACAATGTAAGAAGTTTTCCAGAAGGGAAAAGGAATTGCTATACCCTCAAACCCAAACAAGGCAAAAACAACTTTTTTCTCGTTAGAGCTTACTACAAGTATGGAAATTATGATTACAAAAATTCTGCTCCATTCTTCCACTTCCATCTTGGCGTTAATTTCTGGACAGGATCGGGTAATACCAGTAACGATAGAAGAACGGAAGCCATTCATGTTTCTCGAACCAACAATGTTGATGTACGTCTTATCAACACTGGCCGTGGAAAACCCTTCATTTCGCTGCTCGAACTCTGGCCTCTCAAGGATTCTATATATCTGAACGAGTCTGATTTCTCGCCGCTAGGCGTCGTGACACGCTCTTCTTTGGGAACATCTAAAGCAGATTATGTTTTCATCACATACCCAGAAGATATCTACGGTAGGTCATGGTACCTCGGTAGAGAGATCGAAGACTCAGAGCCAATCGCTACATCAGTTCTGATCGATGGCGATGTGTCAAACTATAAATTACCCAGAGAAGTGTTGGGCACTGCAATTCGTTCAGGGAGCGGTTCCTCCTTATTTATCGAGTTGGATTACAGCACAAATTACGAGTACTATGTTTACCTTCATTTTTATGACTTCGTGGAGCGTCCTCAAGATCAGCAAAGAAAGATGGAAATTACTTTCACGGATACGATCCGAGACAACATAACTCTTCAATACCGGGTGCTCAAAACCATGGTGAGGAGGATGCCTAAAGGGGAATACCTTAGTAACATTTCAGTCACATCCACCCCAGATTCTGGTTTGCCCCCCATGATCAATGCTCTTGAAATCTATAGAGTACTGCCCCAATCGGATTCACCAACTCAGGAAAGGGACGTGAATGCTATGCGGATTGTGAAACAAGCATATAAAATCACCAGAAATTGGCAAGGAGATCCCTGCATGCCACGCGGTTATAGTTGGGACGGTCTGAATTGTAGTTACTTTGACAACATTCCCAGGATCACTTCATTGAACTTGAGCTCAAGCAAATTGACTGGACACATAAATACTTCATTTTCCGATCTCATATCATTGGAGTCCCCGGATTTGTCCAACAATCAATTGAAGGGAGAAATACCTGAAGTTTTAGGAAAACTACCCAATTTGAAACTGCTGGAACAATCTAAGTGGCCCAATTCCAAAGGCCCTAACGGAGAAGAACGGCAATCCTTTAATATTGAGGTAATCCAAGTTCAATCATTAATACATGATGCTATTGGAATTTCTCTTCCATTTGTAGCGACATTATTTCAAAATGACGGGAATCTAAAATCGAAAAACCGTGCTTTTAATCACTGGCAAGTTCTTAGTATTACCAATTCCTTTGAGACTGTTATCGGACAAGGGGGGTTTGGCAAAGTGTACCTGGGCACACTACAAGATGGTACGAAAGTTGCAGTCAAGTTACTCTCAAAATCATCACAACAAGGGTTTAAGGAATTTCAGTCAGAGGCAGAACTTTTGATGGTTGTTCATCATAGGAACTTGGTTTCTCTTGTTGGCTATTGTAACGATGGTGACACGAAAGCACTAGTTTATGAATACATGGATGAAGGAAATCTCCGACAGAAATTATCAGATAAGAATCCATATGCTTTGAAATGGAATGAGAGACTTCAGATAGCATTGGATGCAGCATGTGGTGTGTAA 1779 0.416 MADDGSVVDSGQIYNLSSEYALDGNDEQVWQQMNNVRSFPEGKRNCYTLKPKQGKNNFFLVRAYYKYGNYDYKNSAPFFHFHLGVNFWTGSGNTSNDRRTEAIHVSRTNNVDVRLINTGRGKPFISLLELWPLKDSIYLNESDFSPLGVVTRSSLGTSKADYVFITYPEDIYGRSWYLGREIEDSEPIATSVLIDGDVSNYKLPREVLGTAIRSGSGSSLFIELDYSTNYEYYVYLHFYDFVERPQDQQRKMEITFTDTIRDNITLQYRVLKTMVRRMPKGEYLSNISVTSTPDSGLPPMINALEIYRVLPQSDSPTQERDVNAMRIVKQAYKITRNWQGDPCMPRGYSWDGLNCSYFDNIPRITSLNLSSSKLTGHINTSFSDLISLESPDLSNNQLKGEIPEVLGKLPNLKLLEQSKWPNSKGPNGEERQSFNIEVIQVQSLIHDAIGISLPFVATLFQNDGNLKSKNRAFNHWQVLSITNSFETVIGQGGFGKVYLGTLQDGTKVAVKLLSKSSQQGFKEFQSEAELLMVVHHRNLVSLVGYCNDGDTKALVYEYMDEGNLRQKLSDKNPYALKWNERLQIALDAACGV 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4355g00011 592 Pfam Malectin-like domain 4 309 IPR024788 -
Pral4355g00011 592 Pfam Protein tyrosine and serine/threonine kinase 485 592 IPR001245 GO:0004672|GO:0006468
Pral4355g00011 592 FunFam Leucine-rich repeat receptor-like protein kinase 461 558 - -
Pral4355g00011 592 ProSiteProfiles Protein kinase domain profile. 483 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00011 592 SMART tyrkin_6 483 592 IPR020635 GO:0004713|GO:0006468
Pral4355g00011 592 Gene3D Transferase(Phosphotransferase) domain 1 465 592 - -
Pral4355g00011 592 FunFam Leucine-rich repeat receptor-like kinase 320 441 - -
Pral4355g00011 592 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Pral4355g00011 592 Gene3D Ribonuclease Inhibitor 323 427 IPR032675 -
Pral4355g00011 592 SUPERFAMILY L domain-like 345 415 - -
Pral4355g00011 592 SUPERFAMILY Protein kinase-like (PK-like) 472 592 IPR011009 -
Pral4355g00011 592 PANTHER OS07G0107800 PROTEIN-RELATED 11 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4355g00011 Pral-Chr4355 175474 179878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4355g00011 4 592 Receptor kinase-like Gene Family AT2G19210 36.677 3.68e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4355g00011 Malectin_like 2.9e-62 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4355g00011 - - pcin:129289802 576.244