Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4355g00009 ATGGAAATTACTTTCAACGATACCATCCGAGAGAACATAATTCTTCAGTACCGGGTGCTCAAAACCGTGGTTAAGACAATTCCTGAAGAGGTACATATTTATAACATTTCAATCACATCCACCCCAGATTCTGGTTTGTCCCCCATGATCAATGCTTTTGAGATCTATAGGGTACTGCCCCAGCCGAATTCACCAACTCGAGAAGGGGATGTGGATGTTATGCAGATTGTGAAACATGCATATGACATCACCAGAAATTGGCAAGGAGATCCATGCATGCCAACCAGTTATAGTTGGGAAGGTCTGACTTGTAATTACATTGACAACATCCCATCGGTCACTTCATTGAACTTGAGCTCAAGCAAATTGAGTGGAGAGGTAATTACTTCATTTTCCGACCTCACATCGTTGGAGTCCCTGGATTTGTCCAACAATCAATTGATGGGAGAAATACCTGAAGTTTTAGCAAAACTACCCAAGTTAAAACTACTTAATTTGTCAGGGAACAATCTAAGTGGTTCAATTCCAAAGGCTCTTAGGGAGAAGAACGGCACTTCGTTGATATTGAGTTTGGATCGAAATCCAAGTCCCTGTCAGATCGGTGCTTGCAAAACCAAAACAAAGAAGCCCGTTATACCACTTATTGCATCTGTAGTAGCTTCTGCAGCAGTCCTCGTAATAGTAGTCTGCATTTCTGTGAAGTTTTGCAAACATAAAAGGGGAAAACAAAGTGATATGAAAGGCATCCCGGTGAAGATTTCTTCATTTAGAAAAGACGGGAGTCTAAAATCCAAAAATCGTGCATTTAGTCACTTGGAAGTTCTTAGCATTACCAATGACTTTGAAACCGTAATTGGAGAAGGGGGATTTGGAAAAGTGTACCTTGGAACACTACAAGATGATACACAAGTTGCAGTCAAGTTACTCTCAAAGTCATCACAACAAGGGTTTAAGGAATTTCAGTCAGAGGCAGAACTTTTGATGGTTGTTCATCATAGGAACTTGATTTCTCTTGTTGGCTATTGTGACGATGGTGACACGAAGGCATTACTTTATGAATACATGATTGAAGGAAATCTCCGACAGAAATTATCAGGATTGGACTATTTACATAATGGTTGTAAGCCAGCAATAATCCATAGAGACTTAAAAACTTCCAACATCTTACTAAGTATACACATGCAAGCCAAGATTGCTGATTTTGGATTGTCCAGAGCTTTTGGCAATGATACTAACACTCATATATCAACTCGCCCAGCTGGCACATATGGCTATTTAGACCCTGGGTTCCATAGATCTGGAAATTTGAACAAGAAAAGCGATGTTTACAGTTTTGGGATAATTCTGCTTGAGCTAATGACTGGACAGCGAGCAATAACTGAAACGTCTGACGGGGCACGACACATATCTGATTGGGTAAATCCAAAGCTTGAGACTGGGGATATCCAAGCCATTGTGGGTCCAAGAGTAGAAGGAAAATTCAGTCGTGCTTCAGCATGGAAGTTTCTAGAGATAGCCATGTCTTGCATTACACCAGCACCAATCCAAAGACCTGATATAAATTCTGTTGTATTTGATCTCAAGCAATGTGTGGCTATGGAAGCATCACTGGAAACAAGTATTCTCTGTCTGGATCATACTCTCCTCCATCTGCTAGGTAGGGTTGTTTGTAGCTGCATGCATGGTCTTTCTCTGAATTGA 1701 0.408 MEITFNDTIRENIILQYRVLKTVVKTIPEEVHIYNISITSTPDSGLSPMINAFEIYRVLPQPNSPTREGDVDVMQIVKHAYDITRNWQGDPCMPTSYSWEGLTCNYIDNIPSVTSLNLSSSKLSGEVITSFSDLTSLESLDLSNNQLMGEIPEVLAKLPKLKLLNLSGNNLSGSIPKALREKNGTSLILSLDRNPSPCQIGACKTKTKKPVIPLIASVVASAAVLVIVVCISVKFCKHKRGKQSDMKGIPVKISSFRKDGSLKSKNRAFSHLEVLSITNDFETVIGEGGFGKVYLGTLQDDTQVAVKLLSKSSQQGFKEFQSEAELLMVVHHRNLISLVGYCDDGDTKALLYEYMIEGNLRQKLSGLDYLHNGCKPAIIHRDLKTSNILLSIHMQAKIADFGLSRAFGNDTNTHISTRPAGTYGYLDPGFHRSGNLNKKSDVYSFGIILLELMTGQRAITETSDGARHISDWVNPKLETGDIQAIVGPRVEGKFSRASAWKFLEIAMSCITPAPIQRPDINSVVFDLKQCVAMEASLETSILCLDHTLLHLLGRVVCSCMHGLSLN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4355g00009 566 FunFam Leucine-rich repeat receptor-like protein kinase 257 354 - -
Pral4355g00009 566 Gene3D Ribonuclease Inhibitor 71 188 IPR032675 -
Pral4355g00009 566 Pfam Protein kinase domain 283 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00009 566 PRINTS Leucine-rich repeat signature 158 171 - -
Pral4355g00009 566 PRINTS Leucine-rich repeat signature 137 150 - -
Pral4355g00009 566 Gene3D Transferase(Phosphotransferase) domain 1 355 542 - -
Pral4355g00009 566 PANTHER OS07G0107800 PROTEIN-RELATED 15 531 - -
Pral4355g00009 566 Pfam Leucine rich repeat 111 171 IPR001611 GO:0005515
Pral4355g00009 566 SMART serkin_6 279 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00009 566 SUPERFAMILY Protein kinase-like (PK-like) 262 527 IPR011009 -
Pral4355g00009 566 Gene3D Phosphorylase Kinase; domain 1 285 354 - -
Pral4355g00009 566 FunFam Leucine-rich repeat receptor-like kinase 70 197 - -
Pral4355g00009 566 ProSiteProfiles Leucine-rich repeat profile. 136 159 IPR001611 GO:0005515
Pral4355g00009 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Pral4355g00009 566 ProSiteProfiles Protein kinase domain profile. 279 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00009 566 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Pral4355g00009 566 SUPERFAMILY L domain-like 94 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4355g00009 Pral-Chr4355 136421 141585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4355g00009 35 536 Receptor kinase-like Gene Family AT2G28970 44.841 2.19e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral4355g00009 Pkinase 4.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4355g00009 - - pcin:129289825 676.396