Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4355g00007 ATGAAAACACTGAGAAGTTTCCCAGAAGGCAAAAGGAATTGTTACACACTCAAACCCAGGCAAGGCAAACGCAACAACTATCTCATCAGGGCTTACATGTCATATGGAAACTATGACAACAAAAACTCTATTCCATACTTCCATTTACATCTTGGTGTCAATTTCTGGGCAGAAATTAAGTTTGAAAACGTCAATGCAATTCGACGAAAAACAGTCGTTCAACTGTCCCCAACAAACTACATTGATGTCTGTCTTGTAAACGTTGGTAGAGGGATACCTTTTATTTCCTTGTTAGAACTATGGCCTCTGTCAAATTCTATATATAGAGCCACCTCTAGTTTGCTGCCATTAGGCCTCATGACATGCGTTAACTTGGGTATGTCTGAAAACCTTAAATTTATCAGATATGCAGATGATATCTATGGTAGATCCTGGTTGAATGGAAAGTTGAATAACTCAGAGAAATTCTCCACATCAGAAGCAATTAACAGTGATGTAAAAGAGTATAGACTACCAAATGAAGTGTTAAGAGCTGCAGTCCGAGCACTGAATGATTCAACTTCCTTATATATCAACTTGACCACCATTAATTTTACAGCAGATAGCGAACATTATGTTTACCTTCATTTTTTTGATTTCGAGGAGCATTCTAAGGGTCAAGTAAGAAGCATGGAAATTACTTTTACTGATGCAATCCGAGTGCAAGTAACTCTTAAATACCAGGATGTCTATACCTTGGTTAAGAGAATTCCAAAAGGGGTTAAATTAAATAGTATTTCAATCACATCGACCCCAGGTTCTGGTTTACCCCCGATGATCAATGCTTACGAGATTTATAGAACACTACCCCAACCAAATACCCCAACTCATGAACAAGATGTTGATGCTATGCGGAACATCAAACATGCTTATGACATCATGAGAACCAGTTGGCAGGGTGATCCCTGCATGCCAAAAGAGTACAGGTGGGAAGGTGTGACTTGCAATTACTCTGAGAGCATTCCAAGTGTCACTTCTTTGAACATGAGCTCGAGCAACTTAACAGGACAGATTGCAACTTCATTCTCCAATCTTATGATGTTGGAGGCCTTGGATTTGTCGAGCAACCAATTAACAGGACAAATACCAGAATCCATTGCAGAACTACCCAATTTGAAACTGCTTAATTTGACAGGGAATAATCTCAGAGGCTCAATTCCTAAGGCTTTGAGGAAGAAGTCAACTACTGATTTAACTTTGATTTTGGAAGGAAATCCAGGTCTCTGTAAGACAGGGTCTTGCAAAACCATTACAAAGAAGTTCATAAAACCACTTGTTGCATCCGCAGCCTCTGTGGTGGTTCTTGCAATAATAGTCTGCATTTCTTTGATTCTCTGCAAATACAAAAGAAAACATCTTAGTGACACGAAAGCGTTGTTTTCCAAAAAATATGGTCAGCTTAAATCAAAGAATCAAGGATTTTCTCAGGCTGAAGTTCATGGGATTACCAATGACTTTGCAACTGAAATTGGAGGAGGGGGATTTGGAAAAGTGTACCTTGGAAGACTAAAAGATGGTACTCAAGTTGCAGTCAAATTACTTTCTAAGTCATCACAGCAAGGACTGAATGAGTTTCAATCAGAGGCAAAACTGTTATCCCTTATTTATCATAGAAATCTAGTTTCTCTTATTGGTTTTTGTGACGATGGGGACATGAGAGCTCTGATTTATGAATACATGGCAAAGGGAAATCTCCAGCACCTCCTGTCAGATAAGAACCCAGATATTTTGAGGTGGAATGATAGACTTCAAATTGCATTAGATGCAGCATCTGGATTGGACTATCTACACAACGGTTGTAAGCCACCAATAATTCACAGGGACATAAAATCTTCTAACATTTTGCTAAATGAAACCATGCAAGCCAAAATTGCTGATTTGGGATTGTCTAAAGCTTTTGCCAATGATACTGACACTCACATTTCAACTCGCCCGGCAGGCACATTTGGTTATCTCGACCCTGAGTTCCACAGAACTGGAAACTTGAACAAAAAAAGTGATGTTTATAGTTTTGGGATAATTTTGCTTGAGCTAATGACCGGCCAGCGAGCAATAACTGGAACCCCTGAAGGCACATGCCACATATCTGATTGGGTAAATCCAAAGCTTGAGAATGGTGACATCCAAGCCATTGTGGATCCAAGATTAGAAGGGAAATTCAGTAGTGCTTCAGCATGGAAGTTTCTAGAGATAGCCATTTCTTGCATTAGGCCATCTGCAATCCAAAGACCTGATATAAGTTGTGTTGTAATTGATCTAAAGCAGTGTGTGGCTATGGAAACATCAGTTGAAAGTGCAGAAAGCAGTAGTTTAATCTCAAGCACGACATTGGAGACAAGTTATTCTCAGTCTGGATCATACTCACCTCCATCTGCTAGGTATCTAATTTTAACCATTAATATCACAAACCCAGTCCACCATTTCTTTGTCGTTCCTCTTTCCGATAAACTTGGAAACATGAAGAGCACGCCATCACTGTGGATTCTCGCTTGCTCTGTTTTTGTTTCATTCATACAAGTTGTTGCAGATGATGGCAGCGATTCCGGGGAGATAAGCATTGATTGCGGAACAACCCAAGCAAGCCGGGACGAGAATGGGTTTTATTATGCGGCGGACGATGGAGATGTTGTGGAATCAGGTCGCATATATAATGTATCTTCTGAATATCGCAGTAGAGATGAGCAGGTTTGGCAGCAGCTGAGCACTCTGAGAAGTTTTCCAGAAGGGAAAAGGAATTGCTATACCCTTAAACCCAAAGAAGGCAAAAACAACAACTTTCTCGTCAGAGCTTACTACCTGTATGGAAATTATGACAACAAAAGTTCTGTTCCCGACTTCGACTTCCATCTTGGCGTCAATTTCTGGACACAATCATATGAAGCCGACACTGTTCGAAGAATGGAGATCATTCATGTTTCTCCAACAAACAGTATTGATGTGTGTCTTATCAACACCGGCCATGGAACACCCTTCATTTCGTTGCTCGAACTCTGGCCTCTCCACAAGTCTATATATCGAACCGATTCCAATTTATTGCCGCTGGACCTCATGACACGCTCTTCTCTGGGAACGTCTAAAGAAGATTATGCTTTCATCAGGTACTCAGATGATATCTACGGTAGGTCATGGTTCCTTCAAGCAAAGATCGGAAACTCAGAGCCAATCGGCACATCAGTTGCAATTGATGGTGATGTGAGTGACTACAAATTACCCAAAGAAGTGTTGAGCACTGCAATTCGATCACGGAACGGTTCATCTTCCTTGTTTATCGAGTTGGATTACGGTACAGATTACGAGTACTATGTTTACCTTCATTTTTTTGACTTCGAGGAGCATTCTCAAGATCAGCAAAGAAAGATGGAAATAAGTTTCACGGATACCATCCGGGAGAACATAACTCTTCAATACCGGAAGCTCAAAACCATAGTTAAGACAATACCTAAAGGGGTACATCTTCAGAACATTTCAATCAAGTCGACCCCAGATTCTGGTTTACCCCCCATGATCAATGCCTTTGAGTTGTATAGAGTACTGCCCCAACCTTATTCACCAACTCGAGATGGGGATGTCAATGCCATGAGGATTGTCAAACATTCATATAACATCACCAAAAATTGGCAAGGAGATCCTTGCATGCCCCGCACTTATAGATGGGAAGGTCTGACTTGTGAGGACTCTGACAGCATTCCAAAGATCACTTCATTGAACTTAAGCTCAAGCAAATTGATTGGAGAGATAAATACTTCATTTTCTGAGCTCATATCGTTGGAGTCCCTAGACTTGTCCAACAATCAATTGATGGGAGAAATACCTGAAGTTTTAGCAAAACTATCCAATCTGAAGCTACTTAATTTGTCAGGGAACAATCTATCTGGTTCAATTCCAAAGGCTCTAAAGGAGAAGGATGGGACTTCTTTAATATTGAGCTTGGATCGAAATCCTATTCTCTGCCAAAAAGGTGCTTGCAAAACCAGAAGACAGAAGTCCATTATACCAGTTACTGCGTCTGTAGTAGCTTCTGTAGCAGTCCTTGCAATAGTAATCTGCATATCCGTGAAGTTTTGCAAACGTAAAAGGAAAAAACAAAGTGATATGAAAGTGAAGATTTCTTCATTTCAAAAAGAAGGGAATCTAAAATCAAAAAATCGTGCATTTAATCACTTGGAAGTTCTTAGTATTACCAATCACTTTGAAACCGTAATTGGAGAAGGAGGATTTGGGAAAGTGTACCTCGGCAGGCTACAAGATGATACACAAGTTGCAGTTAAGTTACTCTCAAAGTCATCGCAGCAAGGATTTAAGGAATTTCAGTCAGAGGCAGAACTTTTGATGGTTGTTCATCATAAGAACTTGGTTTCTCTTGTTGGCTATTGTAACGATGATGACATGAAAGTACTAGTTTATGAATACATGAATGAAGGAAATCTTCGACAGAAATTATCAGATAAGAACACGTGCCCTTTGAAATGGAATGAGAGACTTCAGATAGCATTAGATGCCGCATGTGGATTGGACTATCTCCATAATGGTTGTAAGCCAGCAATAATCCATAGAGATTTAAAAACCGCTAACATCTTGCTAAGCAAAAACATGCAAGCCAAGATTGCTGACTTTGGGTTGTCCAGAGCTTTTGCCAATGACACTGACACTCATATTTCAACTCGTCCAGTAGGCACATTTGGTTACCTCGACCCTGAGTTCCACAGAACTGGAAACCTGAATAAAAAAAGTGATATTTATAGTTTTGGGATAATTCTACTTGAGCTAATGACTGGCCAGCCAGCAATAACGGGAACATCTGACAGCATACGTCACATATCTGATTGGGTTAGTCCAAAGCTTGAGACTGGGGATATCCAAGCCATTGTGGATCCAAGATTAGAGGGAAAATTCAGCAGTGCTTCAGCATGGAAGTTTCTAGAAATAGCCATGTCTTGCATTACACCAACAGCAATCCAAAGACCTGATATAAGTTCTGTTGTAATTGATCTAAAGCAATGTTTGGCTATGGAAACATCAATTGAAAATGCAGAAAGCAGCAGTTTAATCCCAAGCACTACATTGGAAGGAAGCTATTCTCAGTCAGCACCATACTCACCACCATCTGCAAGGTAG 5154 0.4022 MKTLRSFPEGKRNCYTLKPRQGKRNNYLIRAYMSYGNYDNKNSIPYFHLHLGVNFWAEIKFENVNAIRRKTVVQLSPTNYIDVCLVNVGRGIPFISLLELWPLSNSIYRATSSLLPLGLMTCVNLGMSENLKFIRYADDIYGRSWLNGKLNNSEKFSTSEAINSDVKEYRLPNEVLRAAVRALNDSTSLYINLTTINFTADSEHYVYLHFFDFEEHSKGQVRSMEITFTDAIRVQVTLKYQDVYTLVKRIPKGVKLNSISITSTPGSGLPPMINAYEIYRTLPQPNTPTHEQDVDAMRNIKHAYDIMRTSWQGDPCMPKEYRWEGVTCNYSESIPSVTSLNMSSSNLTGQIATSFSNLMMLEALDLSSNQLTGQIPESIAELPNLKLLNLTGNNLRGSIPKALRKKSTTDLTLILEGNPGLCKTGSCKTITKKFIKPLVASAASVVVLAIIVCISLILCKYKRKHLSDTKALFSKKYGQLKSKNQGFSQAEVHGITNDFATEIGGGGFGKVYLGRLKDGTQVAVKLLSKSSQQGLNEFQSEAKLLSLIYHRNLVSLIGFCDDGDMRALIYEYMAKGNLQHLLSDKNPDILRWNDRLQIALDAASGLDYLHNGCKPPIIHRDIKSSNILLNETMQAKIADLGLSKAFANDTDTHISTRPAGTFGYLDPEFHRTGNLNKKSDVYSFGIILLELMTGQRAITGTPEGTCHISDWVNPKLENGDIQAIVDPRLEGKFSSASAWKFLEIAISCIRPSAIQRPDISCVVIDLKQCVAMETSVESAESSSLISSTTLETSYSQSGSYSPPSARYLILTINITNPVHHFFVVPLSDKLGNMKSTPSLWILACSVFVSFIQVVADDGSDSGEISIDCGTTQASRDENGFYYAADDGDVVESGRIYNVSSEYRSRDEQVWQQLSTLRSFPEGKRNCYTLKPKEGKNNNFLVRAYYLYGNYDNKSSVPDFDFHLGVNFWTQSYEADTVRRMEIIHVSPTNSIDVCLINTGHGTPFISLLELWPLHKSIYRTDSNLLPLDLMTRSSLGTSKEDYAFIRYSDDIYGRSWFLQAKIGNSEPIGTSVAIDGDVSDYKLPKEVLSTAIRSRNGSSSLFIELDYGTDYEYYVYLHFFDFEEHSQDQQRKMEISFTDTIRENITLQYRKLKTIVKTIPKGVHLQNISIKSTPDSGLPPMINAFELYRVLPQPYSPTRDGDVNAMRIVKHSYNITKNWQGDPCMPRTYRWEGLTCEDSDSIPKITSLNLSSSKLIGEINTSFSELISLESLDLSNNQLMGEIPEVLAKLSNLKLLNLSGNNLSGSIPKALKEKDGTSLILSLDRNPILCQKGACKTRRQKSIIPVTASVVASVAVLAIVICISVKFCKRKRKKQSDMKVKISSFQKEGNLKSKNRAFNHLEVLSITNHFETVIGEGGFGKVYLGRLQDDTQVAVKLLSKSSQQGFKEFQSEAELLMVVHHKNLVSLVGYCNDDDMKVLVYEYMNEGNLRQKLSDKNTCPLKWNERLQIALDAACGLDYLHNGCKPAIIHRDLKTANILLSKNMQAKIADFGLSRAFANDTDTHISTRPVGTFGYLDPEFHRTGNLNKKSDIYSFGIILLELMTGQPAITGTSDSIRHISDWVSPKLETGDIQAIVDPRLEGKFSSASAWKFLEIAMSCITPTAIQRPDISSVVIDLKQCLAMETSIENAESSSLIPSTTLEGSYSQSAPYSPPSAR 1717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4355g00007 1717 FunFam receptor-like protein kinase FERONIA 462 572 - -
Pral4355g00007 1717 SUPERFAMILY L domain-like 1226 1312 - -
Pral4355g00007 1717 SUPERFAMILY L domain-like 319 405 - -
Pral4355g00007 1717 ProSitePatterns Protein kinases ATP-binding region signature. 1414 1436 IPR017441 GO:0005524
Pral4355g00007 1717 ProSiteProfiles Protein kinase domain profile. 1408 1681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00007 1717 CDD STKc_IRAK 1414 1679 - -
Pral4355g00007 1717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Pral4355g00007 1717 Gene3D Transferase(Phosphotransferase) domain 1 574 790 - -
Pral4355g00007 1717 Gene3D Transferase(Phosphotransferase) domain 1 1485 1698 - -
Pral4355g00007 1717 FunFam Leucine-rich repeat receptor-like kinase 1202 1332 - -
Pral4355g00007 1717 MobiDBLite consensus disorder prediction 1698 1717 - -
Pral4355g00007 1717 PANTHER OS07G0107800 PROTEIN-RELATED 864 1685 - -
Pral4355g00007 1717 PRINTS Leucine-rich repeat signature 1290 1303 - -
Pral4355g00007 1717 PRINTS Leucine-rich repeat signature 1269 1282 - -
Pral4355g00007 1717 SMART serkin_6 1408 1681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00007 1717 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00007 1717 SUPERFAMILY Protein kinase-like (PK-like) 1394 1677 IPR011009 -
Pral4355g00007 1717 ProSiteProfiles Leucine-rich repeat profile. 1268 1291 IPR001611 GO:0005515
Pral4355g00007 1717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1528 1540 IPR008271 GO:0004672|GO:0006468
Pral4355g00007 1717 Gene3D Phosphorylase Kinase; domain 1 1414 1484 - -
Pral4355g00007 1717 Gene3D Phosphorylase Kinase; domain 1 503 573 - -
Pral4355g00007 1717 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Pral4355g00007 1717 FunFam Leucine-rich repeat receptor-like protein kinase 1386 1483 - -
Pral4355g00007 1717 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4355g00007 1717 Pfam Leucine rich repeat 1243 1303 IPR001611 GO:0005515
Pral4355g00007 1717 Pfam Leucine rich repeat 335 395 IPR001611 GO:0005515
Pral4355g00007 1717 Gene3D Ribonuclease Inhibitor 1204 1320 IPR032675 -
Pral4355g00007 1717 Gene3D Ribonuclease Inhibitor 294 415 IPR032675 -
Pral4355g00007 1717 Pfam Leucine rich repeat N-terminal domain 292 329 IPR013210 -
Pral4355g00007 1717 Pfam Leucine rich repeat N-terminal domain 1215 1236 IPR013210 -
Pral4355g00007 1717 Pfam Protein tyrosine and serine/threonine kinase 1410 1674 IPR001245 GO:0004672|GO:0006468
Pral4355g00007 1717 Pfam Protein tyrosine and serine/threonine kinase 500 760 IPR001245 GO:0004672|GO:0006468
Pral4355g00007 1717 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 1484 1690 - -
Pral4355g00007 1717 FunFam Leucine-rich repeat receptor-like kinase 292 424 - -
Pral4355g00007 1717 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 573 779 - -
Pral4355g00007 1717 Pfam Malectin-like domain 2 280 IPR024788 -
Pral4355g00007 1717 Pfam Malectin-like domain 866 1190 IPR024788 -
Pral4355g00007 1717 CDD STKc_IRAK 503 768 - -
Pral4355g00007 1717 SMART LRR_typ_2 1290 1313 IPR003591 -
Pral4355g00007 1717 SMART LRR_typ_2 1266 1289 IPR003591 -
Pral4355g00007 1717 SMART LRR_typ_2 382 405 IPR003591 -
Pral4355g00007 1717 SUPERFAMILY Protein kinase-like (PK-like) 487 766 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4355g00007 Pral-Chr4355 80816 115021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4355g00007 1 784 Receptor kinase-like Gene Family AT2G19210 41.698 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral4355g00007 Malectin_like 1.2e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4355g00007 - - minc:123206351 1165.6